GO-CAM Conference Call - 2019-01-15: Difference between revisions

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****Creating a model for one species when the evidence derives from experiments in multiple species
****Creating a model for one species when the evidence derives from experiments in multiple species
**Import of Reactome pathways
**Import of Reactome pathways
**Generation and use of templates
***Glycolysis
***MAPK
***BMP
***Wnt
***ER-UPR
**Model manipulation
***Generation and use of templates
***Merging models
***Copying and/or re-using annotations


= Minutes =
= Minutes =

Revision as of 21:20, 14 January 2019

Meeting URL

Agenda

  • From 2019-01-07 annotation conference call:
    • Import of whole genomes
      • Working meeting at Berkeley the end of this month
      • WormBase and MGI will be the first genome annotation sets to be imported
        • gp2term relations
        • evidence and annotation extensions
        • search, display, editing
        • gpad output
        • overall data flow
        • documentation
    • Continued discussion of modeling questions
      • Annotation of protein complexes and their respective members
        • When to annotate to a complex vs making each individual MF just 'part of' the same process?
        • When to annotate to the same 'instance' of a biological process vs different 'instances'?
        • Creating a model for one species when the evidence derives from experiments in multiple species
    • Import of Reactome pathways
      • Glycolysis
      • MAPK
      • BMP
      • Wnt
      • ER-UPR
    • Model manipulation
      • Generation and use of templates
      • Merging models
      • Copying and/or re-using annotations

Minutes

  • On call:
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