Revision as of 09:22, 12 July 2017

Zoom URL

https://stanford.zoom.us/j/679970729

Viewing annotations in GPAD format - are all being generated by the same protocol?
- Noctua ->Workbenches->Annotation Preview
- Noctua ->Model->Export GPAD
- Noctua->Jenkins

Handling evidence properly
- Complex model resolution to specify gene products along with evidence.
  - evidence test: transferases - protein localization - differentiation
  - Notch signaling - Part 1
  - Karen's concerns regarding evidence usage and mapping
Handling groups as output in the GPAD file.
Creating biological processes to generate regulation annotations.
- http://noctua.berkeleybop.org/editor/graph/gomodel:586fc17a00000366
Generating a tabular interface
Filtering GPAD annotations
- Regulation annotations when a named class exists
  - http://noctua.berkeleybop.org/editor/graph/gomodel:586fc17a00000366
- Causal annotations to molecular functions
  - http://noctua.berkeleybop.org/editor/graph/gomodel:55c3ef4c00000001
Curators should evaluate their workflow for areas where we can improve efficiency - high priority
Import existing CC and BP annotations
Documentation

@@ Line 7: / Line 7: @@
 == Priority list ==
+*Viewing annotations in GPAD format - are all being generated by the same protocol?
+**Noctua ->Workbenches->Annotation Preview
+**Noctua ->Model->Export GPAD
+**Noctua->Jenkins
 *Handling evidence properly