GO-CAM July 12th, 2017: Difference between revisions

From GO Wiki
Jump to navigation Jump to search
Line 50: Line 50:
*What will be the relation between editing preformed in the graphical interface and the information stored in the table editor?
*What will be the relation between editing preformed in the graphical interface and the information stored in the table editor?
*Note that not all models will conform to a design pattern
*Note that not all models will conform to a design pattern
== Priority List ==
=== Viewing annotations in GPAD format ===
*GPAD export and Annotation Preview are consistent
**Are they the same?  Seem to be
*Link to GPADs generated by Heiko's code - most simple annotations and extensions; there are species-specific files
**http://build.berkeleybop.org/job/export-lego-to-legacy/lastSuccessfulBuild/artifact/legacy/gpad/
*Link to GPADs generated by Jim's code - much more complete, but still some issues with evidence; not species-specific files yet






[[Category:Annotation Working Group]]
[[Category:Annotation Working Group]]

Revision as of 11:28, 12 July 2017

Zoom URL

https://stanford.zoom.us/j/679970729

Agenda

Update on Proposal for a Tabular Editing Interface

https://github.com/geneontology/noctua/issues/461

Priority list

Priority list

Minutes

  • On call: David H, Harold, Jim, Karen, Kevin, Kimberly, Pascale, Sabrina, Sage, Seth, Stacia, Terry
  • Regrets: Chris

Software Updates

Update on Proposal for a Tabular Editing Interface

  • Hoping to port over a spreadsheet-like interface from IncaTools project
    • Being used currently for editing DOS-DPs
    • Needs to be able to communicate with minerva
  • Part of the AGR project
    • Three-week time frame (funding) for Noctua development
  • Idea is to have a more P2GO-like, user friendly, intuitive annotation interface
  • Simple design idea is to provide columns that match the fields of a GO annotation
  • Will need input from curators familiar with the P2GO interface
  • One question is whether the table editor should be write only or read-write
    • Feedback so far is that, in the long run, curators would like read-write (i.e. full editing capability)
  • What will be the relation between editing preformed in the graphical interface and the information stored in the table editor?
  • Note that not all models will conform to a design pattern

Priority List

Viewing annotations in GPAD format