GO-CAM November 22, 2017: Difference between revisions

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*[https://github.com/geneontology/noctua/issues/458 github ticket #458 - Attribution with GO-CAM exports to GOC annotation files]
*[https://github.com/geneontology/noctua/issues/458 github ticket #458 - Attribution with GO-CAM exports to GOC annotation files]
*[https://github.com/geneontology/noctua/issues/502 github ticket #502 - providedBy should be used in GPAD export]
*[https://github.com/geneontology/noctua/issues/502 github ticket #502 - providedBy should be used in GPAD export]
*Issue summary: we want to make sure that, in the GPAD files, attribution in the 'Assigned By' field is correctly populated with a curator's annotation groupep
*Issue summary: we want to make sure that, in the GPAD files, attribution in the 'Assigned By' field is correctly populated with a curator's annotation group
*Is this a good time to clean house wrt older or test models?
**Step 1: Curators need to have entries in the groups field of the [https://github.com/geneontology/go-site/blob/master/metadata/users.yaml users.yaml file]
**Step 1: Curators need to have entries in the groups field of the [https://github.com/geneontology/go-site/blob/master/metadata/users.yaml users.yaml file]
***Some groups still need to review their users.yaml:
***Some groups still need to review their users.yaml (missing groups and also missing orcids):
****USC
****USC
****UniProt (SIB and EBI)
****UniProt (SIB and EBI)
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****WB
****WB
****Zfin
****Zfin
**Step 2: Convert any remaining GOC:nn identifiers to orcids


=== Display user and group labels from minerva metadata ===
=== Display user and group labels from minerva metadata ===

Revision as of 11:32, 21 November 2017

Zoom URL

https://stanford.zoom.us/j/679970729

Agenda

Updates/Discussion on 1.0 Release Milestones

Annotation Attribution in GPAD Output Files

Display user and group labels from minerva metadata

Allow negation in Noctua and SAE and in GPAD export

export-lego-to-gpad-sparql should collate by MOD

MInutes

  • On call: