GO-CAM November 8th, 2017: Difference between revisions

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*We need to have groups properly captured in the Assigned By field of output GPAD files
*We need to have groups properly captured in the Assigned By field of output GPAD files
*All current and future Noctua curators who are associated with one or more curation groups need to fill out the groups field in their entry in the users.yaml file
*All current and future Noctua curators who are associated with one or more curation groups need to fill out the groups field in their entry in the users.yaml file
**Full path: https://github.com/geneontology/go-site/blob/master/metadata/users.yaml
*Full path: https://github.com/geneontology/go-site/blob/master/metadata/users.yaml
**Groups are entered as URLs, e.g. http://www.wormbase.org, in single quotes
*Groups are entered as URLs, e.g. http://www.wormbase.org, in single quotes
 
*If curators belong to multiple annotation groups, the first group will be considered the default
*To change groups in Noctua, select from the drop-down list next to the curator name in the upper right of the tool
*ACTION: Added to agenda for 2017-11-14 annotation call
*ACTION: Added [https://github.com/geneontology/go-site/issues/453 github ticket] to go-site repo






[[Category: Annotation Working Group]]
[[Category: Annotation Working Group]]

Revision as of 13:36, 8 November 2017

Zoom URL

https://stanford.zoom.us/j/679970729

Agenda

Noctua GitHub Organization

  • Using projects to organize tickets
  • Using milestones for ticket prioritization
  • Creating new tickets - do we need a different SOP?

Requirements/Roadmap

Noctua Requirements/Roadmap

Attribution

Attribution with GO-CAM exports to GOC annotation files

GPAD Outputs

Simple Annoton Editor

dealing with blank MF in the simple annoton editor

Extend form to include standard GO-CAM model fields

Bare MF annotation should generate part-of triples

  • Editor enhancements to come:
    • Ability to add basic set of annotation extensions, e.g. has_input for an MF
    • Ability to just add a CC annotation and get the resulting part_of annotation in the graphical interface

Minutes

  • On call: David H., Dmitry, Harold, Jim, Karen, Kimberly, Pascale, Paul T., Rob, Sabrina, Seth, Stacia

Attribution

  • We need to have groups properly captured in the Assigned By field of output GPAD files
  • All current and future Noctua curators who are associated with one or more curation groups need to fill out the groups field in their entry in the users.yaml file
  • Full path: https://github.com/geneontology/go-site/blob/master/metadata/users.yaml
  • Groups are entered as URLs, e.g. http://www.wormbase.org, in single quotes
  • If curators belong to multiple annotation groups, the first group will be considered the default
  • To change groups in Noctua, select from the drop-down list next to the curator name in the upper right of the tool
  • ACTION: Added to agenda for 2017-11-14 annotation call
  • ACTION: Added github ticket to go-site repo