GO-CAM Working Group Call 2018-10-23

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Revision as of 07:48, 23 October 2018 by Stacia (talk | contribs) (Minutes)

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Meeting URL



Review Action Items from Montreal Meeting

  • Establish a GO-CAM chat room on https://gitter.im/geneontology/home
    • Seth has established a go-annotation chat room on gitter since this can be synced with the go-annotation repo wrt invitations
    • Will use as a way to get more timely feedback and answers to modeling questions
    • Monitor and collate questions for a GO-CAM FAQ
    • Link from Noctua? Graph editor, forms, landing page?
  • Add an FAQ to the Nocuta/GO-CAM documentation
    • Landing page now linked from main Noctua documentation page
    • Noctua documentation page now linked from Annotation home page
  • Intermediate-level GO-CAM camp?
    • When? Where? Level of interest?
  • Documentation for annotation data flow
    • New annotations captured as GO-CAM models
    • Existing annotations added to GO-CAM models

Noctua Roadmap

Modeling Transcription

Key Points

  • Direct vs Indirect
    • Direct: include target using 'has input' relation for both MF and BP
    • Indirect: do not include target on MF and BP
    • Relation between transcription process and activity of target is the same

Next Week's Meeting

  • October 30th - fifth Tuesday, ad hoc meeting, if desired


  • On call: Barbara, Bob, Chris, David, Dmitry, Dustin, Edith, Giulia, Harold, Jim, Karen, Kevin M, Kimberly, Li, Marie-Claire, Penelope, Petra, Rachael, Rob, Sabrina, Seth, Stacia, Suzi A, Suzi L, Tanya