GO Consortium Meeting 2007: Difference between revisions
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== Topics == | == Topics == | ||
Please add items below that you think need to be presented. | Please add items below that you think need to be presented. We are not -yet- putting these in any particular order or time, right now let us just collect the topics we need to address while we are together. | ||
# The issue of using the GO_REF vs extension of the evidence codes to amplify upon the method that is used. | # The issue of using the GO_REF vs extension of the evidence codes to amplify upon the method that is used. | ||
# gp2protein file: | # gp2protein file: | ||
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#* GOST needs to use the precise sequences, as supplied by the submitting group | #* GOST needs to use the precise sequences, as supplied by the submitting group | ||
#Handling multiple identifiers for gene products and sequences | #Handling multiple identifiers for gene products and sequences | ||
#Evaluation of project tracking methods | |||
== Venue == | == Venue == |
Revision as of 15:37, 8 October 2006
Topics
Please add items below that you think need to be presented. We are not -yet- putting these in any particular order or time, right now let us just collect the topics we need to address while we are together.
- The issue of using the GO_REF vs extension of the evidence codes to amplify upon the method that is used.
- gp2protein file:
- The lagtime between when the protein sequences of a newly sequenced and annotated organism are published, and when they make it into UniProt. For example, even now only ~10% of 27,855 arabidopsis protein sequences are contained in Swiss-Prot. For the final release (version 5) of arabidopsis, 306 proteins (~1%) are available in Swiss-Prot and 374 in TrEMBL. Older arabidopsis sequences are found in TrEMBL, but fully 1/3 of the sequences found in the first release have changed over the life of the project.
- GOST needs to use the precise sequences, as supplied by the submitting group
- Handling multiple identifiers for gene products and sequences
- Evaluation of project tracking methods
Venue
Jesus College Cambridge, UK