Difference between revisions of "GO Galaxy Environment"

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Prototype: http://yuri.lbl.gov:8080
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Lead: TBD
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== Purpose ==
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The GO website lists >50 tools for doing GO-based analyses but these are not well integrated. AmiGO/GOOSE offers some functionality such as slimming, enrichment, data extraction but these are difficult to chain together. A simple integrated environment in which tools could be linked in workflows would be beneficial to the community. Galaxy provides an environment for doing this
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== Deliverables ==
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=== Prototype ===
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Proof of function.
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Status: available on labs: http://berkeleybop.org/galaxy
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=== Report ===
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In progress
  
 
[[Category:SWUG Projects]]
 
[[Category:SWUG Projects]]

Revision as of 16:00, 17 August 2010

Lead: TBD

Purpose

The GO website lists >50 tools for doing GO-based analyses but these are not well integrated. AmiGO/GOOSE offers some functionality such as slimming, enrichment, data extraction but these are difficult to chain together. A simple integrated environment in which tools could be linked in workflows would be beneficial to the community. Galaxy provides an environment for doing this

Deliverables

Prototype

Proof of function.

Status: available on labs: http://berkeleybop.org/galaxy

Report

In progress