GO Galaxy Environment: Difference between revisions
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Lead: Jorrit | |||
[[Category:SWUG Projects]] | Note that detailed project tracking is handled in a [https://docs.google.com/document/d/1MG4l0u3kSF2D4HsJoGrrTrSYW1ENR9cW7gTszHuq-Mc/edit# google doc] | ||
== Purpose == | |||
The GO website lists >50 tools for doing GO-based analyses but these are not well integrated. AmiGO/GOOSE offers some functionality such as slimming, enrichment, data extraction but these are difficult to chain together. A simple integrated environment in which tools could be linked in workflows would be beneficial to the community. Galaxy provides an environment for doing this | |||
== Deliverables == | |||
=== Prototype === | |||
Proof of function. | |||
Status: available on labs: http://galaxy.geneontology.org | |||
=== Report === | |||
In progress | |||
[[Category:SWUG Projects]] [[Category:Galaxy]] |
Latest revision as of 13:51, 18 April 2013
Lead: Jorrit
Note that detailed project tracking is handled in a google doc
Purpose
The GO website lists >50 tools for doing GO-based analyses but these are not well integrated. AmiGO/GOOSE offers some functionality such as slimming, enrichment, data extraction but these are difficult to chain together. A simple integrated environment in which tools could be linked in workflows would be beneficial to the community. Galaxy provides an environment for doing this
Deliverables
Prototype
Proof of function.
Status: available on labs: http://galaxy.geneontology.org
Report
In progress