GO Protege4 Guide: Difference between revisions
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The following assumes Protege version 4.1, [http://obi-ontology.org/page/Tutorials#Protege4 OBI version]. | The following assumes Protege version 4.1, [http://obi-ontology.org/page/Tutorials#Protege4 OBI version]. | ||
== Protege Setup == | |||
See: http://code.google.com/p/caro2/wiki/Getting_started | |||
== Working with multiple, interlinked ontologies == | == Working with multiple, interlinked ontologies == |
Revision as of 19:35, 17 December 2011
- summary A guide for editors of the ontologies hosted by this project. Start here!
Introduction
This page is intended as a guide for editing the suite of ontologies hosted on this site.
Protege setup
The following assumes Protege version 4.1, OBI version.
Protege Setup
See: http://code.google.com/p/caro2/wiki/Getting_started
Working with multiple, interlinked ontologies
Checkout and managing imports
Checkout of full repository currently => all the files you need to import in a single directory. This is likely to change in future as the repository evolves and if/when we want imports to resolve to copies held in other repositories. At this point we will need a standard Protege imports library xml.
Editing multiple ontologies in one session
This is possible, although can easily lead to accidentally saving edits to the wrong file. If you attempt this:
1. Choose the ontology you want to edit from the list at the top of the Protege window:
[1] [https://arthropod-anatomy-ontology.googlecode.com/svn/trunk/images/ont_pick_list_open.png
2. Make sure your ID prefs are set for the ontology you are editing !
Relations (object properties)
Relations used in this project are currently maintained in caro_2.owl. IDs and full definitions for relations come from ro.owl. This is likely to change in the near future so that relations and relevant imported terms are mireoted in from ro.owl.