GO website page GO tools dev

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GO tools developer zone page - currently not on GO website so moving here until its fate is decided

Tools for searching and browsing GO

Annotation tools

  • GoFigure: mysql; java; perl
  • Manatee: perl
  • PubSearch: python, java, perl

Tools for gene expression/microarray analysis

  • CLENCH: perl
  • FatiGO: C, perl
  • GeneMerge: perl
  • GOArray: perl
  • GOstat: perl (src on req)
  • GoSurfer: m$ visual C++
  • GOTM (Gene Ontology Tree Machine): php
  • GOToolBox: perl
  • MAPPFinder: visual basic
  • Onto-Compare: java
  • Onto-Design: java
  • OntoGate: python
  • Ontologizer: java
  • THEA: java

Other tools

  • FuSSiMeG: mysql, java, php