Difference between revisions of "Implementation"

Revision as of 04:31, 14 November 2007

13rd November, 2007

I have solved problems about almost all child terms of "response to drug" term. The changes are already in the lived file.

14th November, 2007

I am working on "drug transport" term.

• Add a new term: GO:0014076 "chemical substance transport"
  
• Move "chemical substance transport" as is_a child of "transport" general term
  
• Add a new term: GO:0014077 "organic substance transport"
  
• Move "organicl substance transport" as is_a child of "transport" general term
  
• Move "antibiotic transport" as part_of "response to antibiotic"
• Copy "antibiotic transport" as is_a of "chemical substance transport"
  
• Move "bicyclomycin transport" as is_a "antibiotic transport"
  
• Copy response to cycloheximide as is_a child of response to antibiotic
  
• Move "cycloheximide transport" as is_a "antibiotic transport"
  
• Move tetracyclin transport is_a GO:0014077 "organic substance transport"
  
• Move organomercurial transport is_a GO:0014077 "organic substance transport"
  
• Move nalidixic acid transport is_a child of antibiotic transport
  
• Move alkane transport as is_a child of organic substance transport
  
• Move carbonyl cyanide m-chlorophenylhydrazone transport as is_a child of organic substance transport
  
• Move daunorubicin transport as is_a "antibiotic transport"
  

To be asked GO curator

• I need to create a branch file in scratch directory named response_to_drug.obo
• Proposal to obsolete drug export GO:0046618 has just 6 gene associations
• Proposal to obsolete multidrug transport GO:0006855 .It has almost the same defintion of drug transport GO:00415893 but it has 318 gene associations.

To be asked ChEBI curator

• amiloride
• acriflavine
• azole
• benomyl
• cycloheximide