Initial kdm unix diff

Output of UNIX diff showing changes in initial commit for kidney development meeting.

2,4c2,4
< date: 08:02:2010 14:57
< saved-by: midori
< auto-generated-by: OBO-Edit 2.1-beta1
---
> date: 22:01:2010 12:00
> saved-by: tanyaberardini
> auto-generated-by: OBO-Edit 2.0
15c15
< remark: cvs version: $Revision: 1.3 $
---
> remark: cvs version: $Revision: 1.976 $
10032c10032
< def: "The interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ." [ISBN:0878932437]
---
> def: "The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ." [ISBN:0878932437]
10770c10770
< def: "The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine." [GOC:dph, GOC:mtg_kidney_jan10, ISBN:0124020607, ISBN:0721662544 "Dorland's Illustrated Medical Dictionary"]
---
> def: "The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine." [GOC:dph, ISBN:0124020607, ISBN:0721662544 "Dorland's Illustrated Medical Dictionary"]
10774c10774
< relationship: part_of GO:0072001 ! renal system development
---
> relationship: part_of GO:0001655 ! urogenital system development
94820c94820
< def: "The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis. The proximal/distal axis is defined by a line that runs from the main body (proximal end) of an organism outward (distal end)." [GOC:dph, GOC:go_curators, GOC:isa_complete]
---
> def: "The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end)." [GOC:dph, GOC:go_curators, GOC:isa_complete]
106851c106851
< is_a: GO:0072089 ! stem cell proliferation
---
> is_a: GO:0008283 ! cell proliferation
106858c106858
< is_a: GO:0072091 ! regulation of stem cell proliferation
---
> is_a: GO:0042127 ! regulation of cell proliferation
184019d184018
< synonym: "renal corpuscle development" EXACT [GOC:mtg_kidney_jan10]
184021c184020
< relationship: part_of GO:0072051 ! juxtaglomerular apparatus development
---
> relationship: part_of GO:0001822 ! kidney development
324239,324242c324238
< synonym: "kidney pattern formation" RELATED [GOC:mtg_kidney_jan10]
< synonym: "kidney pattern specification" EXACT [GOC:mtg_kidney_jan10]
< synonym: "pattern formation involved in kidney development" RELATED [GOC:mtg_kidney_jan10]
< is_a: GO:0072048 ! renal system pattern specification
---
> is_a: GO:0007389 ! pattern specification process
324251c324247
< def: "The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the kidney as it progresses from its formation to the mature state." [GOC:dph, GOC:mtg_2010]
---
> def: "The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the kidney as it progresses from its formation to the mature state." [GOC:dph, GOC:mtg_2010]
340027c340023
< is_a: GO:0072089 ! stem cell proliferation
---
> is_a: GO:0008283 ! cell proliferation
341692,342636d341687
< id: GO:0072001
< name: renal system development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the renal system over time, from its formation to the mature structure. The renal system maintains fluid balance and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products." [GOC:mtg_kidney_jan10]
< is_a: GO:0048731 ! system development
< relationship: part_of GO:0001655 ! urogenital system development
< created_by: midori
< creation_date: 2010-01-25T10:31:00Z
< 
< [Term]
< id: GO:0072002
< name: Malpighian tubule development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the Malpighian tubule over time, from its formation to the mature structure. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which leads into the posterior part of the gut." [GOC:mtg_kidney_jan10]
< is_a: GO:0048513 ! organ development
< relationship: part_of GO:0072001 ! renal system development
< created_by: midori
< creation_date: 2010-01-25T10:54:30Z
< 
< [Term]
< id: GO:0072003
< name: kidney rudiment formation
< namespace: biological_process
< def: "The developmental process pertaining to the initial formation of a kidney rudiment from unspecified parts. A kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine." [GOC:mtg_kidney_jan10]
< is_a: GO:0048646 ! anatomical structure formation involved in morphogenesis
< relationship: part_of GO:0060993 ! kidney morphogenesis
< created_by: midori
< creation_date: 2010-01-25T11:18:58Z
< 
< [Term]
< id: GO:0072004
< name: kidney field specification
< namespace: biological_process
< def: "The process by which regions of the embryo are delineated into the area in which the kidney rudiment will develop." [GOC:mtg_kidney_jan10]
< synonym: "specification of kidney anlage" RELATED [GOC:mtg_kidney_jan10]
< is_a: GO:0010092 ! specification of organ identity
< relationship: part_of GO:0072003 ! kidney rudiment formation
< created_by: midori
< creation_date: 2010-01-25T11:24:33Z
< 
< [Term]
< id: GO:0072005
< name: maintenance of kidney identity
< namespace: biological_process
< def: "The process by which the identity of a kidney is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized." [GOC:mtg_kidney_jan10]
< synonym: "maintenance of kidney anlage identity" RELATED [GOC:mtg_kidney_jan10]
< is_a: GO:0048496 ! maintenance of organ identity
< relationship: part_of GO:0072003 ! kidney rudiment formation
< created_by: midori
< creation_date: 2010-01-25T11:57:41Z
< 
< [Term]
< id: GO:0072006
< name: nephron development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the nephron over time, from its formation to the mature structure. A nephron is the functional unit of the kidney." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0001822 ! kidney development
< created_by: midori
< creation_date: 2010-01-25T01:37:16Z
< 
< [Term]
< id: GO:0072007
< name: mesangial cell differentiation
< namespace: biological_process
< def: "The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesangial cells of the kidney as it progresses from its formation to the mature state." [GOC:mtg_kidney_jan10]
< is_a: GO:0001822 ! kidney development
< is_a: GO:0061005 ! cell differentiation involved in kidney development
< created_by: midori
< creation_date: 2010-01-25T01:59:09Z
< 
< [Term]
< id: GO:0072008
< name: glomerular mesangial cell differentiation
< namespace: biological_process
< def: "The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the glomerular mesangial cells of the kidney as it progresses from its formation to the mature state." [GOC:mtg_kidney_jan10]
< is_a: GO:0072007 ! mesangial cell differentiation
< relationship: part_of GO:0072012 ! glomerulus vasculature development
< created_by: midori
< creation_date: 2010-01-25T01:59:33Z
< 
< [Term]
< id: GO:0072009
< name: nephron epithelium development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the renal vesicle over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. The nephron epithelium is a tissue that covers the surface of a nephron." [GOC:mtg_kidney_jan10]
< is_a: GO:0072073 ! kidney epithelium development
< relationship: part_of GO:0072006 ! nephron development
< created_by: midori
< creation_date: 2010-01-25T02:01:39Z
< 
< [Term]
< id: GO:0072010
< name: glomerular epithelium development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the glomerular epithelium over time, from its formation to the mature structure. The glomerular epithelium is an epithelial tissue that covers the outer surfaces of the glomerulus." [GOC:mtg_kidney_jan10]
< is_a: GO:0072073 ! kidney epithelium development
< relationship: part_of GO:0032835 ! glomerulus development
< created_by: midori
< creation_date: 2010-01-25T02:02:14Z
< 
< [Term]
< id: GO:0072011
< name: glomerular endothelium development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the glomerular endothelium over time, from its formation to the mature structure. The glomerular endothelium is an epithelial tissue that covers the internal surfaces of the glomerulus." [GOC:mtg_kidney_jan10]
< is_a: GO:0072073 ! kidney epithelium development
< relationship: part_of GO:0072012 ! glomerulus vasculature development
< created_by: midori
< creation_date: 2010-01-25T02:02:57Z
< 
< [Term]
< id: GO:0072012
< name: glomerulus vasculature development
< namespace: biological_process
< def: "The biological process whose specific outcome is the progression of a glomerulus vasculature from an initial condition to its mature state. This process begins with the formation of the glomerulus vasculature and ends with the mature structure. The glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the glomerulus." [GOC:mtg_kidney_jan10]
< synonym: "glomerulus capillary development" RELATED [GOC:mtg_kidney_jan10]
< is_a: GO:0001944 ! vasculature development
< relationship: part_of GO:0032835 ! glomerulus development
< created_by: midori
< creation_date: 2010-01-25T02:05:04Z
< 
< [Term]
< id: GO:0072013
< name: glomus development
< namespace: biological_process
< def: "The progression of the glomus over time from its initial formation until its mature state. The glomus is the vascular component of the pronephros and filters waste from the blood before it enters the pronephric tubules." [GOC:mtg_kidney_jan10, PMID:10572058]
< is_a: GO:0032835 ! glomerulus development
< relationship: part_of GO:0048793 ! pronephros development
< created_by: midori
< creation_date: 2010-01-25T02:23:19Z
< 
< [Term]
< id: GO:0072014
< name: proximal tubule development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the proximal tubule over time, from its formation to the mature structure. The proximal tubule is a  is a nephron tubule that connects Bowman's capsule to the loop of Henle. It has a brush border epithelial morphology." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< is_a: GO:0072080 ! nephron tubule development
< created_by: midori
< creation_date: 2010-01-25T02:33:46Z
< 
< [Term]
< id: GO:0072015
< name: glomerular visceral epithelial cell development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of a glomerular visceral epithelial cell over time, from its formation to the mature structure. A glomerular visceral epithelial cell is a specialized epithelial cell that contains \"feet\" that interdigitate with the \"feet\" of other glomerular epithelial cells." [GOC:mtg_kidney_jan10]
< synonym: "podocyte development" RELATED [GOC:mtg_kidney_jan10]
< is_a: GO:0002064 ! epithelial cell development
< relationship: part_of GO:0072010 ! glomerular epithelium development
< created_by: midori
< creation_date: 2010-01-25T02:12:45Z
< 
< [Term]
< id: GO:0072016
< name: glomerular parietal epithelial cell development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of a glomerular parietal epithelial cell over time, from its formation to the mature structure. Glomerular parietal epithelial cells are specialized epithelial cells that form tight junctions as a barrier to protein transport." [GOC:mtg_kidney_jan10]
< synonym: "Bowman's capsule development" EXACT [GOC:mtg_kidney_jan10]
< is_a: GO:0002064 ! epithelial cell development
< relationship: part_of GO:0072010 ! glomerular epithelium development
< created_by: midori
< creation_date: 2010-01-25T02:13:16Z
< 
< [Term]
< id: GO:0072017
< name: distal tubule development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the distal tubule over time, from its formation to the mature structure. The distal tubule is a nephron tubule that consists of the convoluted and straight distal tubule segments." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< is_a: GO:0072080 ! nephron tubule development
< created_by: midori
< creation_date: 2010-01-25T02:34:19Z
< 
< [Term]
< id: GO:0072018
< name: intermediate tubule development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the interemdiate tubule over time, from its formation to the mature structure. The interemdiate tubule is a nephron tubule that lies between the proximal and distal tubules." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< is_a: GO:0072080 ! nephron tubule development
< created_by: midori
< creation_date: 2010-01-25T02:34:44Z
< 
< [Term]
< id: GO:0072019
< name: proximal convoluted tubule development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the proximal convoluted tubule over time, from its formation to the mature structure. The proximal convoluted tubule is the most proximal portion of the proximal tubule and extends from the glomerular capsule to the proximal straight tubule." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072014 ! proximal tubule development
< created_by: midori
< creation_date: 2010-01-25T02:35:35Z
< 
< [Term]
< id: GO:0072020
< name: proximal straight tubule development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the proximal straight tubule over time, from its formation to the mature structure. The proximal straight tubule isthe part of the descending limb that extends from the proximal convoluted tubule to the descending thin tubule." [GOC:mtg_kidney_jan10]
< synonym: "S3 development" EXACT [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072014 ! proximal tubule development
< created_by: midori
< creation_date: 2010-01-25T02:36:14Z
< 
< [Term]
< id: GO:0072021
< name: ascending thin limb development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of an ascending thin limb over time, from its formation to the mature structure. The ascending thin limb is a segment of a nephron tubule that is permeable to ions but not to water." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072018 ! intermediate tubule development
< created_by: midori
< creation_date: 2010-01-25T02:37:13Z
< 
< [Term]
< id: GO:0072022
< name: descending thin limb development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the descending thin limb over time, from its formation to the mature structure. The descending thin limb is the first part of the nephon tubule, and concentrates urine." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072018 ! intermediate tubule development
< created_by: midori
< creation_date: 2010-01-25T02:37:47Z
< 
< [Term]
< id: GO:0072023
< name: thick ascending limb development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the thick ascending limb over time, from its formation to the mature structure. The thick ascending limb is the portion of the distal straight tubule that connects to the distal convoluted tubule." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072026 ! distal straight tubule development
< created_by: midori
< creation_date: 2010-01-25T02:39:51Z
< 
< [Term]
< id: GO:0072024
< name: macula densa development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the macula densa over time, from its formation to the mature structure. The macula densa is an area of specialized cells in the distal tubule that makes contact with the vascular pole of the glomerulus." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072006 ! nephron development
< relationship: part_of GO:0072051 ! juxtaglomerular apparatus development
< created_by: midori
< creation_date: 2010-01-25T02:40:15Z
< 
< [Term]
< id: GO:0072025
< name: distal convoluted tubule development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the distal convoluted tubule over time, from its formation to the mature structure. The distal convoluted tubule is a portion of the nephron tubule that connects the loop of Henle to the collecting duct." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072017 ! distal tubule development
< created_by: midori
< creation_date: 2010-01-25T02:40:45Z
< 
< [Term]
< id: GO:0072026
< name: distal straight tubule development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the distal straight tubule over time, from its formation to the mature structure. The distal straight tubule is a portion of the nephron tubule that extends from the thin ascending tubule to the distal convoluted tubule." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072017 ! distal tubule development
< created_by: midori
< creation_date: 2010-01-25T02:41:39Z
< 
< [Term]
< id: GO:0072027
< name: connecting tubule development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the connecting tubule over time, from its formation to the mature structure. The connecting tubule is a tubular segment of the nephron; it connects the distal convoluted tubule to the collecting duct." [GOC:mtg_kidney_jan10]
< synonym: "connecting duct development" EXACT [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< is_a: GO:0072080 ! nephron tubule development
< created_by: midori
< creation_date: 2010-01-25T02:42:05Z
< 
< [Term]
< id: GO:0072028
< name: nephron morphogenesis
< namespace: biological_process
< def: "The process by which the anatomical structures of the nephron are generated and organized. Morphogenesis pertains to the creation of form. A nephron is the functional unit of the kidney." [GOC:mtg_kidney_jan10]
< is_a: GO:0009653 ! anatomical structure morphogenesis
< relationship: part_of GO:0060993 ! kidney morphogenesis
< relationship: part_of GO:0072006 ! nephron development
< created_by: midori
< creation_date: 2010-01-25T02:45:52Z
< 
< [Term]
< id: GO:0072029
< name: long nephron development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of a long nephron over time, from its formation to the mature structure. Long nephrons are associated with juxtamedullary glomeruli and extend to the inner medulla." [GOC:mtg_kidney_jan10]
< synonym: "juxtamedullary nephron development" RELATED [GOC:mtg_kidney_jan10]
< is_a: GO:0072006 ! nephron development
< created_by: midori
< creation_date: 2010-01-25T02:49:08Z
< 
< [Term]
< id: GO:0072030
< name: short nephron development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of a short nephron over time, from its formation to the mature structure. Short nephrons are associated with mid-cortical glomeruli, and have no short ascending limb, so the limb is situated in the outer medulla." [GOC:mtg_kidney_jan10]
< is_a: GO:0072006 ! nephron development
< created_by: midori
< creation_date: 2010-01-25T02:49:32Z
< 
< [Term]
< id: GO:0072031
< name: S1 development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the S1 portion of the proximal convoluted tubule over time, from its formation to the mature structure. The S1 portion of the tubule is responsible for water reabsorption and is poorly permeable to chloride and urea." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072019 ! proximal convoluted tubule development
< created_by: midori
< creation_date: 2010-01-25T02:55:57Z
< 
< [Term]
< id: GO:0072032
< name: S2 development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the S2 portion of the proximal convoluted tubule over time, from its formation to the mature structure. The S2 portion of the tubule is involved in reabsorption of water and sodium chloride." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072019 ! proximal convoluted tubule development
< created_by: midori
< creation_date: 2010-01-25T02:56:36Z
< 
< [Term]
< id: GO:0072033
< name: renal vesicle formation
< namespace: biological_process
< def: "The developmental process pertaining to the initial formation of the renal vesicle from condensed mesenchymal cells. The renal vesicle is the primordial structure of the nephron epithelium, and is formed by the condensation of mesenchymal cells." [GOC:mtg_kidney_jan10]
< synonym: "nephron epithelium formation" RELATED [GOC:mtg_kidney_jan10]
< is_a: GO:0048646 ! anatomical structure formation involved in morphogenesis
< relationship: part_of GO:0002009 ! morphogenesis of an epithelium
< relationship: part_of GO:0072077 ! renal vesicle morphogenesis
< created_by: midori
< creation_date: 2010-01-25T02:57:03Z
< 
< [Term]
< id: GO:0072034
< name: positive regulation of renal vesicle formation
< namespace: biological_process
< def: "Signaling at short range between cells of the ureteric bud terminus and the kidney mesenchyme that positively regulates the formation of the renal vesicle." [GOC:mtg_kidney_jan10]
< synonym: "nephron induction" EXACT [GOC:mtg_kidney_jan10]
< synonym: "positive regulation of nephron formation" EXACT [GOC:mtg_kidney_jan10]
< is_a: GO:0031128 ! developmental induction
< is_a: GO:0090184 ! positive regulation of kidney development
< intersection_of: GO:0065007 ! biological regulation
< intersection_of: positively_regulates GO:0072033 ! renal vesicle formation
< relationship: positively_regulates GO:0072033 ! renal vesicle formation
< created_by: midori
< creation_date: 2010-01-25T02:58:18Z
< 
< [Term]
< id: GO:0072035
< name: pre-tubular aggregate formation
< namespace: biological_process
< def: "The cell adhesion process by which mammary mesenchyme cells adhere to one another in the initial stages of the formation of the pre-tubular aggregate, the earliest recognizable structure of the kidney." [GOC:mtg_kidney_jan10]
< synonym: "mesenchymal cell condensation involved in renal vesicle formation" EXACT [GOC:mtg_kidney_jan10]
< synonym: "nephron epithelium formation" RELATED [GOC:mtg_kidney_jan10]
< is_a: GO:0016337 ! cell-cell adhesion
< relationship: part_of GO:0072033 ! renal vesicle formation
< created_by: midori
< creation_date: 2010-01-25T03:03:10Z
< 
< [Term]
< id: GO:0072036
< name: mesenchymal to epithelial transition involved in renal vesicle formation
< namespace: biological_process
< def: "A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the renal vesicle." [GOC:mtg_kidney_jan10]
< is_a: GO:0060231 ! mesenchymal to epithelial transition
< relationship: part_of GO:0072033 ! renal vesicle formation
< created_by: midori
< creation_date: 2010-01-25T03:04:24Z
< 
< [Term]
< id: GO:0072037
< name: mesenchymal stem cell differentiation involved in nephron morphogenesis
< namespace: biological_process
< def: "The process whereby a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephron. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells." [GOC:mtg_kidney_jan10]
< is_a: GO:0048863 ! stem cell differentiation
< relationship: part_of GO:0072028 ! nephron morphogenesis
< created_by: midori
< creation_date: 2010-01-25T03:07:39Z
< 
< [Term]
< id: GO:0072038
< name: mesenchymal stem cell maintenance involved in nephron morphogenesis
< namespace: biological_process
< def: "The process by which an organism retains a population of mesenchymal stem cells that contributes to the shaping of a nephron. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells." [GOC:mtg_kidney_jan10]
< is_a: GO:0035019 ! somatic stem cell maintenance
< relationship: part_of GO:0072028 ! nephron morphogenesis
< created_by: midori
< creation_date: 2010-01-25T03:08:05Z
< 
< [Term]
< id: GO:0072039
< name: regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis
< namespace: biological_process
< def: "Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptosis that contributes to the shaping of the nephron." [GOC:mtg_kidney_jan10]
< is_a: GO:0042981 ! regulation of apoptosis
< relationship: regulates GO:0072038 ! mesenchymal stem cell maintenance involved in nephron morphogenesis
< created_by: midori
< creation_date: 2010-01-25T03:08:34Z
< 
< [Term]
< id: GO:0072040
< name: negative regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis
< namespace: biological_process
< def: "Any process that reduces the occurrence or rate of mesenchymal stem cell death by apoptosis that contributes to the shaping of the nephron." [GOC:mtg_kidney_jan10]
< is_a: GO:0043066 ! negative regulation of apoptosis
< is_a: GO:0072039 ! regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis
< relationship: negatively_regulates GO:0072038 ! mesenchymal stem cell maintenance involved in nephron morphogenesis
< created_by: midori
< creation_date: 2010-01-25T03:09:30Z
< 
< [Term]
< id: GO:0072041
< name: positive regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis
< namespace: biological_process
< def: "Any process that increases the occurrence or rate of mesenchymal stem cell death by apoptosis that contributes to the shaping of the nephron." [GOC:mtg_kidney_jan10]
< is_a: GO:0043065 ! positive regulation of apoptosis
< is_a: GO:0072039 ! regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis
< relationship: positively_regulates GO:0072038 ! mesenchymal stem cell maintenance involved in nephron morphogenesis
< created_by: midori
< creation_date: 2010-01-25T03:10:32Z
< 
< [Term]
< id: GO:0072042
< name: regulation of mesenchymal stem cell proliferation involved in nephron morphogenesis
< namespace: biological_process
< def: "Any process that modulates the frequency, rate or extent of mesenchymal stem cell proliferation and contributes to the shaping of a nephron." [GOC:mtg_kidney_jan10]
< is_a: GO:0072091 ! regulation of stem cell proliferation
< relationship: regulates GO:0072090 ! mesenchymal stem cell proliferation involved in nephron morphogenesis
< created_by: midori
< creation_date: 2010-01-25T03:11:26Z
< 
< [Term]
< id: GO:0072043
< name: regulation of pre-tubular aggregate formation by cell-cell signaling
< namespace: biological_process
< def: "Any process that mediates the transfer of information from one cell to another that modulates the rate, frequency, or extent of pre-tubular aggregate formation. Pre-tubular aggregate formation is the cell adhesion process by which mammary mesenchyme cells adhere to one another in the initial stages of the formation of the pre-tubular aggregate, the earliest recognizable structure of the kidney." [GOC:mtg_kidney_jan10]
< is_a: GO:0007267 ! cell-cell signaling
< is_a: GO:0022407 ! regulation of cell-cell adhesion
< intersection_of: GO:0065007 ! biological regulation
< intersection_of: regulates GO:0072035 ! pre-tubular aggregate formation
< relationship: regulates GO:0072035 ! pre-tubular aggregate formation
< created_by: midori
< creation_date: 2010-01-25T03:12:03Z
< 
< [Term]
< id: GO:0072044
< name: collecting duct development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of a collecting duct over time, from its formation to the mature structure. The collecting duct is a portion of the nephron through which water flows, moving passively down its concentration gradient." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0001822 ! kidney development
< created_by: midori
< creation_date: 2010-01-25T03:18:06Z
< 
< [Term]
< id: GO:0072045
< name: convergent extension involved in nephron morphogenesis
< namespace: biological_process
< def: "The morphogenetic process in which the renal epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to the shaping of a nephron." [GOC:mtg_kidney_jan10]
< is_a: GO:0060026 ! convergent extension
< relationship: part_of GO:0072028 ! nephron morphogenesis
< created_by: midori
< creation_date: 2010-01-25T03:22:47Z
< 
< [Term]
< id: GO:0072046
< name: establishment of planar polarity involved in nephron morphogenesis
< namespace: biological_process
< def: "Coordinated organization of groups of cells in the plane of an epithelium that contributes to the shaping of a nephron." [GOC:mtg_kidney_jan10]
< synonym: "establishment of planar cell polarity involved in nephron morphogenesis" NARROW [GOC:mtg_kidney_jan10]
< is_a: GO:0001736 ! establishment of planar polarity
< relationship: part_of GO:0072028 ! nephron morphogenesis
< created_by: midori
< creation_date: 2010-01-25T03:24:04Z
< 
< [Term]
< id: GO:0072047
< name: proximal/distal pattern formation involved in nephron development
< namespace: biological_process
< def: "The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron. The proximal/distal axis is defined by a line that runs from the center of the kidney (proximal end) outward (distal end)." [GOC:mtg_kidney_jan10]
< synonym: "proximal-distal pattern formation involved in nephron development" EXACT [GOC:mtg_kidney_jan10]
< synonym: "proximal/distal nephron patterning" EXACT [GOC:mtg_kidney_jan10]
< is_a: GO:0009954 ! proximal/distal pattern formation
< is_a: GO:0061004 ! pattern specification involved in kidney development
< relationship: part_of GO:0072006 ! nephron development
< created_by: midori
< creation_date: 2010-01-25T03:30:48Z
< 
< [Term]
< id: GO:0072048
< name: renal system pattern specification
< namespace: biological_process
< def: "Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system." [GOC:mtg_kidney_jan10]
< synonym: "renal system pattern formation" RELATED [GOC:mtg_kidney_jan10]
< is_a: GO:0007389 ! pattern specification process
< relationship: part_of GO:0072001 ! renal system development
< created_by: midori
< creation_date: 2010-01-25T03:31:51Z
< 
< [Term]
< id: GO:0072049
< name: comma-shaped body morphogenesis
< namespace: biological_process
< def: "The process by which the comma-shaped body is generated and organized. Morphogenesis pertains to the creation of form. The comma-shaped body is the precursor structure to the S-shaped body that contributes to the morphogenesis of the nephron." [GOC:mtg_kidney_jan10]
< is_a: GO:0009653 ! anatomical structure morphogenesis
< relationship: part_of GO:0072028 ! nephron morphogenesis
< created_by: midori
< creation_date: 2010-01-25T03:44:48Z
< 
< [Term]
< id: GO:0072050
< name: S-shaped body morphogenesis
< namespace: biological_process
< def: "The process by which the S-shaped body is generated and organized. Morphogenesis pertains to the creation of form. The S-shaped body is the successor of the comma-shaped body that contributes to the morphogenesis of the nephron." [GOC:mtg_kidney_jan10]
< is_a: GO:0009653 ! anatomical structure morphogenesis
< relationship: part_of GO:0072028 ! nephron morphogenesis
< created_by: midori
< creation_date: 2010-01-25T03:45:19Z
< 
< [Term]
< id: GO:0072051
< name: juxtaglomerular apparatus development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the juxtaglomerular apparatus over time, from its formation to the mature structure. The juxtaglomerular apparatus is an anatomical structure that lies adjacent to the glomerulus and regulates kidney function." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0001822 ! kidney development
< created_by: midori
< creation_date: 2010-01-25T03:52:23Z
< 
< [Term]
< id: GO:0072052
< name: juxtaglomerulus cell differentiation
< namespace: biological_process
< def: "The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the kidney as it progresses from its formation to the mature state." [GOC:mtg_kidney_jan10]
< is_a: GO:0061005 ! cell differentiation involved in kidney development
< relationship: part_of GO:0072051 ! juxtaglomerular apparatus development
< created_by: midori
< creation_date: 2010-01-25T03:58:01Z
< 
< [Term]
< id: GO:0072053
< name: renal inner medulla development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the renal inner medulla over time, from its formation to the mature structure. The renal inner medulla is the innermost region of the kidney." [GOC:mtg_kidney_jan10]
< synonym: "inner renal medulla development" EXACT [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0001822 ! kidney development
< created_by: midori
< creation_date: 2010-01-25T03:59:37Z
< 
< [Term]
< id: GO:0072054
< name: renal outer medulla development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the renal outer medulla over time, from its formation to the mature structure. The renal outer medulla is the region of the kidney that lies between the renal cortex and the renal inner medulla." [GOC:mtg_kidney_jan10]
< synonym: "outer renal medulla development" EXACT [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0001822 ! kidney development
< created_by: midori
< creation_date: 2010-01-25T04:00:42Z
< 
< [Term]
< id: GO:0072055
< name: renal cortex development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the renal cortex over time, from its formation to the mature structure. The renal cortex is the outer region of the kidney." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0001822 ! kidney development
< created_by: midori
< creation_date: 2010-01-25T04:01:12Z
< 
< [Term]
< id: GO:0072056
< name: pyramids development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the kidney pyramids over time, from its formation to the mature structure. Kidney pyramids are the conical masses that make up the renal medulla; they contain the loops of Henle, the collecting ducts, and the renal arterioles." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0001822 ! kidney development
< created_by: midori
< creation_date: 2010-01-25T04:01:36Z
< 
< [Term]
< id: GO:0072057
< name: inner stripe development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the inner stripe over time, from its formation to the mature structure. The inner stripe is a deep, centrally located portion of the renal outer medulla and is traversed by thick and thin portions of nephron tubules." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072054 ! renal outer medulla development
< created_by: midori
< creation_date: 2010-01-25T04:01:58Z
< 
< [Term]
< id: GO:0072058
< name: outer stripe development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the outer stripe over time, from its formation to the mature structure. The outer stripe is the region of the kidney that lies distal to the line of termination of the straight renal tubules." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072054 ! renal outer medulla development
< created_by: midori
< creation_date: 2010-01-25T04:02:56Z
< 
< [Term]
< id: GO:0072059
< name: cortical collecting duct development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the cortical collecting duct over time, from its formation to the mature structure. The cortical collecting duct is the portion of the collecting duct that resides in the renal cortex." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072044 ! collecting duct development
< created_by: midori
< creation_date: 2010-01-25T04:07:07Z
< 
< [Term]
< id: GO:0072060
< name: outer medullary collecting duct development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the outer medullary collecting duct over time, from its formation to the mature structure. The outer medullary collecting duct is the portion of the collecting duct that lies in the renal outer medulla." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< is_a: GO:0072044 ! collecting duct development
< created_by: midori
< creation_date: 2010-01-25T04:08:18Z
< 
< [Term]
< id: GO:0072061
< name: inner medullary collecting duct development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the inner medullary collecting duct over time, from its formation to the mature structure. The inner medullary collecting duct is the portion of the collecting duct that lies in the renal inner medulla." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< is_a: GO:0072044 ! collecting duct development
< created_by: midori
< creation_date: 2010-01-25T04:08:45Z
< 
< [Term]
< id: GO:0072062
< name: S1 cell differentiation
< namespace: biological_process
< def: "The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the S1 cells of the kidney as it progresses from its formation to the mature state." [GOC:mtg_kidney_jan10]
< is_a: GO:0061005 ! cell differentiation involved in kidney development
< relationship: part_of GO:0072031 ! S1 development
< created_by: midori
< creation_date: 2010-01-25T04:11:17Z
< 
< [Term]
< id: GO:0072063
< name: short descending thin limb development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the short descending thin limb over time, from its formation to the mature structure. The short descending thin limb is a part of the descending thin limb of a short nephron that has a squamous epithelial morphology and concentrates urine." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072022 ! descending thin limb development
< relationship: part_of GO:0072030 ! short nephron development
< created_by: midori
< creation_date: 2010-01-25T04:12:39Z
< 
< [Term]
< id: GO:0072064
< name: long descending thin limb development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the long descending thin limb over time, from its formation to the mature structure. The long descending thin limb is a part of the descending thin limb of a long nephron that has a squamous epithelial morphology and concentrates urine." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072022 ! descending thin limb development
< relationship: part_of GO:0072029 ! long nephron development
< created_by: midori
< creation_date: 2010-01-25T04:13:17Z
< 
< [Term]
< id: GO:0072065
< name: long descending thin limb bend development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the long descending thin limb bend over time, from its formation to the mature structure. The long descending thin limb bend is a part of the descending thin limb of a long nephron that lies beyond the prebend segment." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072022 ! descending thin limb development
< relationship: part_of GO:0072029 ! long nephron development
< created_by: midori
< creation_date: 2010-01-25T04:13:38Z
< 
< [Term]
< id: GO:0072066
< name: prebend segment development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the prebend segment over time, from its formation to the mature structure. The prebend segment is a part of the descending thin limb that lies before the bend and exhibits robust sodium chloride reabsorption." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072022 ! descending thin limb development
< created_by: midori
< creation_date: 2010-01-25T04:14:02Z
< 
< [Term]
< id: GO:0072067
< name: early distal convoluted tubule development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the early distal convoluted tubule over time, from its formation to the mature structure. The early distal convoluted tubule contains DCT cells and is vasopressin-sensitive." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072025 ! distal convoluted tubule development
< created_by: midori
< creation_date: 2010-01-25T04:15:17Z
< 
< [Term]
< id: GO:0072068
< name: late distal convoluted tubule development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the late distal convoluted tubule over time, from its formation to the mature structure. The late distal convoluted tubule contains DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-insensitive." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072025 ! distal convoluted tubule development
< created_by: midori
< creation_date: 2010-01-25T04:15:50Z
< 
< [Term]
< id: GO:0072069
< name: DCT cell differentiation
< namespace: biological_process
< def: "The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the distal convoluted cells of the kidney as it progresses from its formation to the mature state." [GOC:mtg_kidney_jan10]
< synonym: "distal convoluted tubule cell differentiation" EXACT [GOC:mtg_kidney_jan10]
< is_a: GO:0061005 ! cell differentiation involved in kidney development
< relationship: part_of GO:0072025 ! distal convoluted tubule development
< created_by: midori
< creation_date: 2010-01-25T04:17:22Z
< 
< [Term]
< id: GO:0072070
< name: loop of Henle development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the loop of Henle over time, from its formation to the mature structure. The loop of Henle is a nephron tubule that connects the proximal convoluted tubule to the distal convoluted tubule." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< is_a: GO:0072080 ! nephron tubule development
< created_by: midori
< creation_date: 2010-01-25T04:20:27Z
< 
< [Term]
< id: GO:0072071
< name: interstitial cell differentiation
< namespace: biological_process
< def: "The process whereby relatively unspecialized cells acquire specialized structural and/or functional features that characterize the interstitial cells of the kidney as it progresses from its formation to the mature state." [GOC:mtg_kidney_jan10]
< is_a: GO:0061005 ! cell differentiation involved in kidney development
< created_by: midori
< creation_date: 2010-01-25T04:34:31Z
< 
< [Term]
< id: GO:0072072
< name: kidney stroma development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the kidney stroma over time, from its formation to the mature structure. The kidney stroma is the mesenchyme of the mature kidney." [GOC:mtg_kidney_jan10]
< is_a: GO:0072074 ! kidney mesenchyme development
< relationship: part_of GO:0001822 ! kidney development
< created_by: midori
< creation_date: 2010-01-25T04:35:36Z
< 
< [Term]
< id: GO:0072073
< name: kidney epithelium development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of an epithelium in the kidney over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure." [GOC:mtg_kidney_jan10]
< is_a: GO:0060429 ! epithelium development
< relationship: part_of GO:0001822 ! kidney development
< created_by: midori
< creation_date: 2010-01-25T04:37:42Z
< 
< [Term]
< id: GO:0072074
< name: kidney mesenchyme development
< namespace: biological_process
< def: "The biological process whose specific outcome is the progression of a kidney mesenchyme from an initial condition to its mature state. This process begins with the formation of kidney mesenchyme and ends with the mature structure. Kidney mesenchyme is the tissue made up of loosely connected mesenchymal cells in the kidney." [GOC:mtg_kidney_jan10]
< is_a: GO:0060485 ! mesenchyme development
< relationship: part_of GO:0001822 ! kidney development
< created_by: midori
< creation_date: 2010-01-25T04:39:04Z
< 
< [Term]
< id: GO:0072075
< name: metanephric mesenchyme development
< namespace: biological_process
< def: "The biological process whose specific outcome is the progression of a metanephric mesenchyme from an initial condition to its mature state. This process begins with the formation of metanephric mesenchyme and ends with the mature structure. Metanephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the metanophros." [GOC:mtg_kidney_jan10]
< is_a: GO:0072074 ! kidney mesenchyme development
< relationship: part_of GO:0001656 ! metanephros development
< created_by: midori
< creation_date: 2010-01-25T04:40:11Z
< 
< [Term]
< id: GO:0072076
< name: nephrogenic mesenchyme development
< namespace: biological_process
< def: "The biological process whose specific outcome is the progression of a nephrogenic mesenchyme from an initial condition to its mature state. This process begins with the formation of nephrogenic mesenchyme and ends with the mature structure. Nephrogenic mesenchyme is the tissue made up of loosely connected mesenchymal cells in the nephron." [GOC:mtg_kidney_jan10]
< is_a: GO:0072074 ! kidney mesenchyme development
< relationship: part_of GO:0072006 ! nephron development
< created_by: midori
< creation_date: 2010-01-25T04:40:44Z
< 
< [Term]
< id: GO:0072077
< name: renal vesicle morphogenesis
< namespace: biological_process
< def: "The process by which the anatomical structures of the renal vesicle are generated and organized. Morphogenesis pertains to the creation of form. The renal vesicle is the primordial structure of the nephron epithelium, and is formed by the condensation of mesenchymal cells." [GOC:mtg_kidney_jan10]
< is_a: GO:0002009 ! morphogenesis of an epithelium
< relationship: part_of GO:0072028 ! nephron morphogenesis
< relationship: part_of GO:0072088 ! nephron epithelium morphogenesis
< created_by: midori
< creation_date: 2010-02-01T02:21:06Z
< 
< [Term]
< id: GO:0072078
< name: nephron tubule morphogenesis
< namespace: biological_process
< def: "The process by which a nephron tubule are generated and organized. Morphogenesis pertains to the creation of form. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney." [GOC:mtg_kidney_jan10]
< is_a: GO:0060562 ! epithelial tube morphogenesis
< relationship: part_of GO:0072028 ! nephron morphogenesis
< relationship: part_of GO:0072080 ! nephron tubule development
< created_by: midori
< creation_date: 2010-02-01T02:25:14Z
< 
< [Term]
< id: GO:0072079
< name: nephron tubule formation
< namespace: biological_process
< def: "The developmental process pertaining to the initial formation of a nephron tubule from unspecified parts. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney." [GOC:mtg_kidney_jan10]
< is_a: GO:0048646 ! anatomical structure formation involved in morphogenesis
< relationship: part_of GO:0072078 ! nephron tubule morphogenesis
< created_by: midori
< creation_date: 2010-02-01T02:29:26Z
< 
< [Term]
< id: GO:0072080
< name: nephron tubule development
< namespace: biological_process
< def: "The progression of a nephron tubule over time, from its initial formation to the mature structure. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney." [GOC:mtg_kidney_jan10]
< is_a: GO:0048856 ! anatomical structure development
< relationship: part_of GO:0072006 ! nephron development
< created_by: midori
< creation_date: 2010-02-01T02:32:12Z
< 
< [Term]
< id: GO:0072081
< name: specification of nephron tubule identity
< namespace: biological_process
< def: "The process by which the tubules arranged along the proximal/distal axis of the nephron acquire their identity." [GOC:bf, GOC:mtg_kidney_jan10]
< is_a: GO:0007379 ! segment specification
< relationship: part_of GO:0072047 ! proximal/distal pattern formation involved in nephron development
< relationship: part_of GO:0072079 ! nephron tubule formation
< created_by: midori
< creation_date: 2010-02-01T02:42:34Z
< 
< [Term]
< id: GO:0072082
< name: specification of proximal tubule identity
< namespace: biological_process
< def: "The process by which the proximal tubule of the kidney nephron acquires its identity." [GOC:bf, GOC:mtg_kidney_jan10]
< is_a: GO:0072081 ! specification of nephron tubule identity
< relationship: part_of GO:0072014 ! proximal tubule development
< created_by: midori
< creation_date: 2010-02-01T02:44:34Z
< 
< [Term]
< id: GO:0072083
< name: specification of intermediate tubule identity
< namespace: biological_process
< def: "The process by which the intermediate tubule of the kidney nephron acquires its identity. The intermediate tubule lies beween the proximal and distal tubules along the proximodistal axis of the nephron, and forms part of the loop of Henle in mammals." [GOC:bf, GOC:mtg_kidney_jan10]
< is_a: GO:0072081 ! specification of nephron tubule identity
< relationship: part_of GO:0072018 ! intermediate tubule development
< created_by: midori
< creation_date: 2010-02-01T02:45:51Z
< 
< [Term]
< id: GO:0072084
< name: specification of distal tubule identity
< namespace: biological_process
< def: "The process by which the distal tubule of the kidney nephron acquires its identity." [GOC:bf, GOC:mtg_kidney_jan10]
< is_a: GO:0072081 ! specification of nephron tubule identity
< relationship: part_of GO:0072017 ! distal tubule development
< created_by: midori
< creation_date: 2010-02-01T02:47:53Z
< 
< [Term]
< id: GO:0072085
< name: specification of connecting tubule identity
< namespace: biological_process
< def: "The process by which the connecting tubule of the kidney nephron acquires its identity." [GOC:bf, GOC:mtg_kidney_jan10]
< is_a: GO:0072081 ! specification of nephron tubule identity
< relationship: part_of GO:0072027 ! connecting tubule development
< created_by: midori
< creation_date: 2010-02-01T02:49:11Z
< 
< [Term]
< id: GO:0072086
< name: specification of loop of Henle identity
< namespace: biological_process
< def: "The process by which the loop of Henle of the kidney nephron acquires its identity." [GOC:bf, GOC:mtg_kidney_jan10]
< is_a: GO:0072081 ! specification of nephron tubule identity
< relationship: part_of GO:0072070 ! loop of Henle development
< created_by: midori
< creation_date: 2010-02-01T02:49:35Z
< 
< [Term]
< id: GO:0072087
< name: renal vesicle development
< namespace: biological_process
< def: "The process whose specific outcome is the progression of the renal vesicle over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. The renal vesicle is the primordial structure of the nephron epithelium, and is formed by the condensation of mesenchymal cells." [GOC:mtg_kidney_jan10]
< is_a: GO:0072073 ! kidney epithelium development
< relationship: part_of GO:0072009 ! nephron epithelium development
< created_by: midori
< creation_date: 2010-02-08T01:18:31Z
< 
< [Term]
< id: GO:0072088
< name: nephron epithelium morphogenesis
< namespace: biological_process
< def: "The process by which the anatomical structures of the nephron epithelium are generated and organized. Morphogenesis pertains to the creation of form. The nephron epithelium is a tissue that covers the surface of a nephron." [GOC:mtg_kidney_jan10]
< is_a: GO:0072009 ! nephron epithelium development
< created_by: midori
< creation_date: 2010-02-08T01:19:06Z
< 
< [Term]
< id: GO:0072089
< name: stem cell proliferation
< namespace: biological_process
< def: "The multiplication or reproduction of stem cells, resulting in the expansion of a stem cell population.  A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells." [GOC:mtg_kidney_jan10]
< is_a: GO:0008283 ! cell proliferation
< created_by: midori
< creation_date: 2010-02-08T02:03:36Z
< 
< [Term]
< id: GO:0072090
< name: mesenchymal stem cell proliferation involved in nephron morphogenesis
< namespace: biological_process
< def: "The multiplication or reproduction of mesenchymal stem cells, resulting in the expansion of a stem cell population, that contributes to the shaping of a nephron." [GOC:mtg_kidney_jan10]
< is_a: GO:0072089 ! stem cell proliferation
< created_by: midori
< creation_date: 2010-02-08T02:05:54Z
< 
< [Term]
< id: GO:0072091
< name: regulation of stem cell proliferation
< namespace: biological_process
< def: "Any process that modulates the frequency, rate or extent of stem cell proliferation. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells." [GOC:mtg_kidney_jan10]
< is_a: GO:0042127 ! regulation of cell proliferation
< is_a: GO:0065007 ! biological regulation
< intersection_of: GO:0065007 ! biological regulation
< intersection_of: regulates GO:0072089 ! stem cell proliferation
< relationship: regulates GO:0072089 ! stem cell proliferation
< created_by: midori
< creation_date: 2010-02-08T02:09:03Z
< 
< [Term]

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