Instructions for GitHub for GO: Difference between revisions
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* '''[https://github.com/geneontology/go-ontology Ontology]'''. Source files for the Gene Ontology. | * '''[https://github.com/geneontology/go-ontology Ontology]'''. Source files for the Gene Ontology. | ||
* '''[https://github.com/geneontology/go-annotation Annotation]. Annotation queries/issues, disputes, including PAINT disputes. | * '''[https://github.com/geneontology/go-annotation Annotation]'''. Annotation queries/issues, disputes, including PAINT disputes. | ||
* '''[https://github.com/geneontology/go-site GO-site]. A collection of metadata, tools, and files associated with the Gene Ontology public web presence. | * '''[https://github.com/geneontology/go-site GO-site]'''. A collection of metadata, tools, and files associated with the Gene Ontology public web presence. | ||
* '''[https://github.com/geneontology/amigo AmiGO] bugs and feature requests. | * '''[https://github.com/geneontology/amigo AmiGO]''' bugs and feature requests. | ||
* '''[https://github.com/geneontology/geneontology.github.io GO website]. The GO public presence, '''[http://geneontology.org/ geneontology.org]'''. | * '''[https://github.com/geneontology/geneontology.github.io GO website]'''. The GO public presence, '''[http://geneontology.org/ geneontology.org]'''. | ||
===GO-CAM models and Noctua=== | ===GO-CAM models and Noctua=== |
Revision as of 06:59, 8 April 2019
GitHub account
Main repositories and their scope
- Ontology. Source files for the Gene Ontology.
- Annotation. Annotation queries/issues, disputes, including PAINT disputes.
- GO-site. A collection of metadata, tools, and files associated with the Gene Ontology public web presence.
- AmiGO bugs and feature requests.
- GO website. The GO public presence, geneontology.org.
GO-CAM models and Noctua
- GO-CAM models repository
noctua-models
Noctua stack
Bugs/feature requests: noctua
Noctua Simple Annotation Editor workbench
Bugs/feature requests: simple-annoton-editor
Noctua entity ontology
neo
Reasoner (?)
noctua-reasoner = minerva
PAINT bugs and feature requests for PAINT
paint (Huaiyu?)
Repo coordinators
Each repo has a coordinator. The responsibilities of the coordinator are to:
- Add assignee(s) to each issue
- Add labels as appropriate
- Follow up
- Propose prioritization for tickets (shared responsibility with product owner, technical lead, PIs, managers, creator of ticket, etc)
Procedure for using the GitHub repositories
- Create issue in the appropriate tracker
- If you want, add label for your group
- Other labels are added by the repo coordinator
Tracking issues
Daily Emails to go-consortium
Automatic emails are sent daily to the go-consortium
mailing list with a list of the new and updated tickets for these two trackers:
- Github Ontology Tracker Update
- Github Annotation Tracker Update
Make sure to look at these emails and comment on tickets that may impact your work as appropriate.