LEGO May 4 2015
Agenda
Continued Discussion of March Consistency Exercise Paper
Specific Questions/Issues
- Use of in_absence_of and in_presence_of annotation extensions.
- How to adequately capture the effects of protein binding on subsequent complex formation and resulting molecular functions.
Begin Discussion of April Consistency Exercise Paper
Specific Questions/Issues
- Use of occurs_in relation for molecular function annotations
- What constitutes sufficient evidence for adding this extension, as CC annotations may be from a different experiment than the MF annotation?
- For example, protein binding based on Y2H or whole cell lysates (IPI) with separate experiments describing localization (IDA).