Difference between revisions of "Lung development genes"

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(Created page with 'The MGI group supplied the initial gene set of 14 genes based on recent MGI PI interest in lung development. Annotation Progress {|border="1" cell spacing="0" cellpadding="5" al…')
 
 
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[[Category:Lung Development Genes]]
 
The MGI group supplied the initial gene set of 14 genes based on recent MGI PI interest in lung development.
 
The MGI group supplied the initial gene set of 14 genes based on recent MGI PI interest in lung development.
  
Annotation Progress
+
==November 2009 targets==
 +
 
 +
Annotation Progress - - <font color ="red"> High priority targets are in red</font>
 
{|border="1" cell spacing="0" cellpadding="5" align="center"
 
{|border="1" cell spacing="0" cellpadding="5" align="center"
 
!Panther ID  
 
!Panther ID  
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!Human
 
!Human
 
|-
 
|-
|PTHR13935
+
|http://wiki.geneontology.org/index.php/PTHR13935
 
|Ascl1
 
|Ascl1
 +
| -
 +
| -
 
|
 
|
 +
| -
 +
|done(3)
 
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|
|
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|(1/2 done)
|
+
|done
|
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|done (2)
|
 
|
 
|
 
|
 
 
|-
 
|-
|PTHR11486
+
|http://wiki.geneontology.org/index.php/PTHR11486
|Fgf8/10
+
|<font color ="red">Fgf8/10</font>
|
+
| -
|
+
| -
|
 
|
 
|
 
|
 
|
 
|
 
 
|
 
|
 +
| -
 +
| -
 +
|done
 
|
 
|
 
|
 
|
 
|
 
|
 +
|key features in (21/37)
 +
|done
 +
|done (2)
 
|-
 
|-
|PTHR11829
+
|http://wiki.geneontology.org/index.php/PTHR11829
|Foxa2
+
|Foxa2 (also assigned in December)
|
+
| -
|
+
| done(4)
|
+
| done but not appropriate for functional transfer
|
+
| -
|
+
| -
|
+
|done(1)
|
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|done
|
 
|
 
 
|
 
|
 
|
 
|
 
|
 
|
 +
|done
 +
|done (1)
 
|-
 
|-
|PTHR10071
+
|http://wiki.geneontology.org/index.php/PTHR10071
 
|Gata6
 
|Gata6
 +
| -
 +
|done (4)
 +
|done but not appropriate for functional transfer
 +
|done (1)
 +
|done(21)
 
|
 
|
 
|
 
|
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|
 
|
 
|
 
|
|
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|done
|
 
|
 
|
 
|
 
 
|
 
|
 
|-
 
|-
|PTHR19818
+
|http://wiki.geneontology.org/index.php/PTHR19818
 
|Gli2/3
 
|Gli2/3
 +
| -
 +
| -
 +
|done (1), but likely mis prediction
 +
|done (2)
 +
| -
 +
|done(2)
 
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|
|
+
|done
|
+
|done (2)
|
 
|
 
|
 
|
 
|
 
|
 
 
|-
 
|-
|PTHR24083
+
|http://wiki.geneontology.org/index.php/PTHR24083
 
|Hnf4a
 
|Hnf4a
 +
| -
 +
| -
 +
|  -
 +
| -
 +
| -
 +
|done(2)
 +
|done
 
|
 
|
 
|
 
|
 
|
 
|
|
+
|done
|
+
|done (1)
|
 
|
 
|
 
|
 
|
 
|
 
|
 
 
|-
 
|-
|PTHR24416
+
|http://wiki.geneontology.org/index.php/PTHR24416
 
|Kdr
 
|Kdr
 +
| -
 +
| -
 +
| -
 +
| -
 +
| -
 
|
 
|
 +
|done
 
|
 
|
 
|
 
|
 
|
 
|
|
+
|done
|
 
|
 
|
 
|
 
|
 
|
 
 
|
 
|
 
|-
 
|-
|PTHR24340
+
|http://wiki.geneontology.org/index.php/PTHR24340
 
|Nkx2-1
 
|Nkx2-1
 +
| -
 +
| -
 +
| -
 +
| -
 +
| -
 
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|
|
+
|done
|
+
|done
|
+
|done (2)
|
 
|
 
|
 
|
 
|
 
 
|-
 
|-
|PTHR10796
+
|http://wiki.geneontology.org/index.php/PTHR10796
 
|Ptch1
 
|Ptch1
 +
| -
 +
| done(1)
 +
| -
 +
|done (2)
 +
|done(2)
 +
|done(3)
 
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|
|
+
|done
|
 
|
 
|
 
|
 
|
 
|
 
 
|
 
|
 
|-
 
|-
|PTHR24082
+
|http://wiki.geneontology.org/index.php/PTHR24082
 
|Rara
 
|Rara
 +
| -
 +
| -
 +
| -
 +
| -
 +
| -
 +
|done(3)
 
|
 
|
 
|
 
|
 
|
 
|
 
|
 
|
|
+
|done
|
+
|done (2)
|
 
|
 
|
 
|
 
|
 
|
 
 
|-
 
|-
|PTHR10270
+
|http://wiki.geneontology.org/index.php/PTHR10270
|Sox18
+
|Sox18 (Sox8?)
|
+
| -
|
+
| done(1)
|
+
|done but not appropriate for functional transfer
|
+
|done(5)
|
+
|done(1)
|
+
|done(2)
|
+
|done
|
 
|
 
|
 
 
|
 
|
 
|
 
|
 +
|done
 +
|done
 +
|done (4)
 
|-
 
|-
|PTHR12025
+
|http://wiki.geneontology.org/index.php/PTHR12025
 
|Vegfa
 
|Vegfa
 +
| -
 +
| -
 +
| -
 +
| -
 +
| -
 
|
 
|
 
|
 
|
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|
 
|
 
|
 
|
|
+
|done
|
+
|1 of 3 done
|
 
|
 
|
 
|
 
|
 
 
|-
 
|-
 +
|}

Latest revision as of 12:24, 8 April 2014

The MGI group supplied the initial gene set of 14 genes based on recent MGI PI interest in lung development.

November 2009 targets

Annotation Progress - - High priority targets are in red

Panther ID set label E.coli SGD S. pombe dictyBase TAIR WormBase Zebrafish FlyBase Chicken MGI RGD Human
http://wiki.geneontology.org/index.php/PTHR13935 Ascl1 - - - done(3) (1/2 done) done done (2)
http://wiki.geneontology.org/index.php/PTHR11486 Fgf8/10 - - - - done key features in (21/37) done done (2)
http://wiki.geneontology.org/index.php/PTHR11829 Foxa2 (also assigned in December) - done(4) done but not appropriate for functional transfer - - done(1) done done done (1)
http://wiki.geneontology.org/index.php/PTHR10071 Gata6 - done (4) done but not appropriate for functional transfer done (1) done(21) done
http://wiki.geneontology.org/index.php/PTHR19818 Gli2/3 - - done (1), but likely mis prediction done (2) - done(2) done done (2)
http://wiki.geneontology.org/index.php/PTHR24083 Hnf4a - - - - - done(2) done done done (1)
http://wiki.geneontology.org/index.php/PTHR24416 Kdr - - - - - done done
http://wiki.geneontology.org/index.php/PTHR24340 Nkx2-1 - - - - - done done done (2)
http://wiki.geneontology.org/index.php/PTHR10796 Ptch1 - done(1) - done (2) done(2) done(3) done
http://wiki.geneontology.org/index.php/PTHR24082 Rara - - - - - done(3) done done (2)
http://wiki.geneontology.org/index.php/PTHR10270 Sox18 (Sox8?) - done(1) done but not appropriate for functional transfer done(5) done(1) done(2) done done done done (4)
http://wiki.geneontology.org/index.php/PTHR12025 Vegfa - - - - - done 1 of 3 done