MENGO Lignin degradation: Difference between revisions

From GO Wiki
Jump to navigation Jump to search
No edit summary
Line 15: Line 15:
[GOC:MENGO_TT]
[GOC:MENGO_TT]


GO:XXXXXX107
====GO:XXXXXX107:positive regulation of lignin biosynthetic process====
name: positive regulation of lignin biosynthetic process
 
namespace: biological process
namespace: biological process
def: Any process that activates or increases the frequency, rate or extent of  cell wall cellulose biosynthesis
def: Any process that activates or increases the frequency, rate or extent of  cell wall cellulose biosynthesis
is_a: GO:XXXXXX: regulation of lignin biosynthetic process
[GOC:MENGO_TT]
[GOC:MENGO_TT]
is_a: GO:XXXXXX: regulation of lignin biosynthetic process


====GO:XXXXXX108:negative regulation of lignin biosynthetic process====


GO:XXXXXX108
name: negative regulation of lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that stops, prevents or reduces the rate or extent of cellulose biosynthesis
def: Any process that stops, prevents or reduces the rate or extent of cellulose biosynthesis
[GOC:MENGO_TT]
 
is_a: GO:XXXXXX: regulation of  lignin biosynthetic process
is_a: GO:XXXXXX: regulation of  lignin biosynthetic process


[GOC:MENGO_TT]


====GO:XXXXXX109:regulation of lignin catabolic process


GO:XXXXXX109
name: regulation of lignin catabolic process
namespace: biological process
namespace: biological process
def: Any process that modulates  the frequency, rate or extent of cell wall lignin biosynthesis
def: Any process that modulates  the frequency, rate or extent of cell wall lignin biosynthesis
regulates : GO:0046274: lignin catabolic process
[GOC:MENGO_TT]
[GOC:MENGO_TT]
regulates : GO:0046274: lignin catabolic process


====GO:XXXXXX110:positive regulation of lignin biosynthetic process====


GO:XXXXXX110
name: positive regulation of lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that activates or increases the frequency, rate or extent of  cell wall cellulose biosynthesis
def: Any process that activates or increases the frequency, rate or extent of  cell wall cellulose biosynthesis
[GOC:MENGO_TT]
 
is_a: GO:XXXXXX: regulation of lignin catabolic process
is_a: GO:XXXXXX: regulation of lignin catabolic process


[GOC:MENGO_TT]


====GO:XXXXXX111:negative regulation of lignin biosynthetic process====


GO:XXXXXX111
name: negative regulation of lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that stops, prevents or reduces the rate or extent of cellulose biosynthesis
def: Any process that stops, prevents or reduces the rate or extent of cellulose biosynthesis
[GOC:MENGO_TT]
 
is_a: GO:XXXXXX: regulation of  lignin catabolic process
is_a: GO:XXXXXX: regulation of  lignin catabolic process


[GOC:MENGO_TT]


====GO:XXXXXX112:regulation of lignin catabolic process====


GO:XXXXXX112
name: regulation of lignin catabolic process
namespace: biological process
namespace: biological process
def: Any process that modulates  the frequency, rate or extent of cell wall lignin biosynthesis
def: Any process that modulates  the frequency, rate or extent of cell wall lignin biosynthesis
regulates : GO:0046274: lignin catabolic process
[GOC:MENGO_TT]
[GOC:MENGO_TT]
regulates : GO:0046274: lignin catabolic process


====GO:XXXXXX113:positive regulation of lignin biosynthetic process====


GO:XXXXXX113
name: positive regulation of lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that activates or increases the frequency, rate or extent of  cell wall cellulose biosynthesis
def: Any process that activates or increases the frequency, rate or extent of  cell wall cellulose biosynthesis
[GOC:MENGO_TT]
 
is_a: GO:XXXXXX: regulation of lignin catabolic process
is_a: GO:XXXXXX: regulation of lignin catabolic process


[GOC:MENGO_TT]
====GO:XXXXXX114:negative regulation of lignin biosynthetic process====


GO:XXXXXX114
name: negative regulation of lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that stops, prevents or reduces the rate or extent of cellulose biosynthesis
def: Any process that stops, prevents or reduces the rate or extent of cellulose biosynthesis
[GOC:MENGO_TT]
 
is_a: GO:XXXXXX: regulation of  lignin catabolic process
is_a: GO:XXXXXX: regulation of  lignin catabolic process


====GO:XXXXXX115:monolignol biosynthetic process====


namespace: biological process


GO:XXXXXX115
name: monolignol biosynthetic process
namespace: biological process
def: The chemical reactions and pathways resulting in the  formation of  
def: The chemical reactions and pathways resulting in the  formation of  
monolignol,  source materials for biosynthesis of both lignans and lignin
monolignol,  source materials for biosynthesis of both lignans and lignin
part_of : GO:0009809: lignin biosynthetic process
[GOC:MENGO_TT]
[GOC:MENGO_TT]
part_of : GO:0009809: lignin biosynthetic process


====GO:XXXXXX116:regulation of monolignol biosynthetic process====


GO:XXXXXX116
name: regulation of monolignol biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that modulates  the frequency, rate or extent of monolignol biosynthesis
def: Any process that modulates  the frequency, rate or extent of monolignol biosynthesis
regulates: GO:0009809: lignin biosynthetic process
[GOC:MENGO_TT]
[GOC:MENGO_TT]
regulates: GO:0009809: lignin biosynthetic process


====GO:XXXXXX117:positive regulation of monolignol biosynthetic process====


GO:XXXXXX117
name: positive regulation of monolignol biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that activates or increases the frequency, rate or extent of monolignol biosynthesis
def: Any process that activates or increases the frequency, rate or extent of monolignol biosynthesis
is_a: regulation of monolignol biosynthetic process
[GOC:MENGO_TT]
[GOC:MENGO_TT]
is_a: regulation of monolignol biosynthetic process


====GO:XXXXXX118:negative regulation of monolignol biosynthetic process====


GO:XXXXXX118
name: negative regulation of monolignol biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that stops, prevents or reduces the rate or extent of monolignol biosynthesis
def: Any process that stops, prevents or reduces the rate or extent of monolignol biosynthesis
[GOC:MENGO_TT]
[GOC:MENGO_TT]
is_a: regulation of monolignol biosynthetic process
is_a: regulation of monolignol biosynthetic process


====GO:XXXXXX119:p-hydroxyphenyl lignin biosynthetic process====


namespace: biological process


GO:XXXXXX119
name: p-hydroxyphenyl lignin biosynthetic process
namespace: biological process
def: The chemical reactions and pathways resulting in the  formation of p-hydroxyphenyl lignin,
def: The chemical reactions and pathways resulting in the  formation of p-hydroxyphenyl lignin,
[GOC:MENGO_TT]
 
part of : GO:XXXXXXXXX: monolignol biosynthetic process
part of : GO:XXXXXXXXX: monolignol biosynthetic process
Synonym: H-lignin biosynthetic process
Synonym: H-lignin biosynthetic process


[GOC:MENGO_TT]
====GO:XXXXXX120:regulation of p-hydroxyphenyl lignin biosynthetic process====


GO:XXXXXX120
name: regulation of p-hydroxyphenyl lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that modulates  the frequency, rate or extent of p-hydroxyphenyl lignin biosynthesis
def: Any process that modulates  the frequency, rate or extent of p-hydroxyphenyl lignin biosynthesis
[GOC:MENGO_TT]
 
regulates: GO:0009809: p-hydroxyphenyl -lignin biosynthetic process
regulates: GO:0009809: p-hydroxyphenyl -lignin biosynthetic process


[GOC:MENGO_TT]
====GO:XXXXXX121:positive regulation of p-hydroxyphenyl -lignin biosynthetic process====


GO:XXXXXX121
name: positive regulation of p-hydroxyphenyl -lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that activates or increases the frequency, rate or extent of p-hydroxyphenyl lignin biosynthesis
def: Any process that activates or increases the frequency, rate or extent of p-hydroxyphenyl lignin biosynthesis
is_a: regulation of p-hydroxyphenyl -lignin biosynthetic process
[GOC:MENGO_TT]
[GOC:MENGO_TT]
is_a: regulation of p-hydroxyphenyl -lignin biosynthetic process


====GO:XXXXXX122:negative regulation of p-hydroxyphenyl -lignin biosynthetic process====


GO:XXXXXX122
name: negative regulation of p-hydroxyphenyl -lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that stops, prevents or reduces the rate or extent of p-hydroxyphenyl lignin biosynthesis
def: Any process that stops, prevents or reduces the rate or extent of p-hydroxyphenyl lignin biosynthesis
[GOC:MENGO_TT]
 
is_a: regulation of p-hydroxyphenyl -lignin biosynthetic process
is_a: regulation of p-hydroxyphenyl -lignin biosynthetic process


[GOC:MENGO_TT]


====GO:XXXXXX123:guaiacyl lignin biosynthetic process====


GO:XXXXXX123
name: guaiacyl lignin biosynthetic process
namespace: biological process
namespace: biological process
def: The chemical reactions and pathways resulting in the  formation of guaiacyl lignin,
def: The chemical reactions and pathways resulting in the  formation of guaiacyl lignin,
[GOC:MENGO_TT]
 
part of : GO:XXXXXXXXX: monolignol biosynthetic process
part of : GO:XXXXXXXXX: monolignol biosynthetic process
synonym: G-lignin biosynthetic process
synonym: G-lignin biosynthetic process


[GOC:MENGO_TT]
====GO:XXXXXX124:regulation of guaiacyl lignin biosynthetic process====


GO:XXXXXX124
name: regulation of guaiacyl lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that modulates  the frequency, rate or extent of guaiacyl lignin biosynthesis
def: Any process that modulates  the frequency, rate or extent of guaiacyl lignin biosynthesis
regulates: GO:0009809: guaiacyl -lignin biosynthetic process
[GOC:MENGO_TT]
[GOC:MENGO_TT]
regulates: GO:0009809: guaiacyl -lignin biosynthetic process


====GO:XXXXXX125:positive regulation of guaiacyl -lignin biosynthetic process====


GO:XXXXXX125
name: positive regulation of guaiacyl -lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that activates or increases the frequency, rate or extent of Any process that modulates  the frequency, rate or extent of guaiacyl lignin biosynthesis
def: Any process that activates or increases the frequency, rate or extent of Any process that modulates  the frequency, rate or extent of guaiacyl lignin biosynthesis
is_a: regulation of guaiacyl lignin biosynthetic process
[GOC:MENGO_TT]
[GOC:MENGO_TT]
is_a: regulation of guaiacyl lignin biosynthetic process


====GO:XXXXXX126:negative regulation of guaiacyl -lignin biosynthetic process====


GO:XXXXXX126
name: negative regulation of guaiacyl -lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that stops, prevents or reduces the rate or extent of Any process that modulates  the frequency, rate or extent of guaiacyl lignin biosynthesis [GOC:MENGO_TT]
def: Any process that stops, prevents or reduces the rate or extent of Any process that modulates  the frequency, rate or extent of guaiacyl lignin biosynthesis [GOC:MENGO_TT]
is_a: regulation of guaiacyl -lignin biosynthetic process
is_a: regulation of guaiacyl -lignin biosynthetic process


[GOC:MENGO_TT]




GO:XXXXXX127
====GO:XXXXXX127:syringal  lignin biosynthetic process====
name: syringal  lignin biosynthetic process
 
namespace: biological process
namespace: biological process
def: The chemical reactions and pathways resulting in the  formation of syringal lignin,
def: The chemical reactions and pathways resulting in the  formation of syringal lignin,
[GOC:MENGO_TT]
 
part of : GO:XXXXXXXXX: monolignol biosynthetic process
part of : GO:XXXXXXXXX: monolignol biosynthetic process
synonym: syringal lignin biosynthetic process
synonym: syringal lignin biosynthetic process


[GOC:MENGO_TT]
====GO:XXXXXX128:regulation of syringal lignin biosynthetic process====


GO:XXXXXX128
name: regulation of syringal lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that modulates  the frequency, rate or extent of syringal lignin biosynthesis [GOC:MENGO_TT]
def: Any process that modulates  the frequency, rate or extent of syringal lignin biosynthesis [GOC:MENGO_TT]
regulates: GO:0009809: syringal lignin biosynthetic process
regulates: GO:0009809: syringal lignin biosynthetic process


[GOC:MENGO_TT]
====GO:XXXXXX129:positive regulation of syringal lignin biosynthetic process====


GO:XXXXXX129
name: positive regulation of syringal lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that activates or increases the frequency, rate or extent of syringal lignin biosynthesis
def: Any process that activates or increases the frequency, rate or extent of syringal lignin biosynthesis
is_a: regulation of syringal lignin biosynthetic process
[GOC:MENGO_TT]
[GOC:MENGO_TT]
is_a: regulation of syringal lignin biosynthetic process


====GO:XXXXXX130:negative regulation of syringal lignin biosynthetic process====


GO:XXXXXX130
name: negative regulation of syringal lignin biosynthetic process
namespace: biological process
namespace: biological process
def: Any process that stops, prevents or reduces the rate or extent of syringal lignin biosynthesis
def: Any process that stops, prevents or reduces the rate or extent of syringal lignin biosynthesis
[GOC:MENGO_TT]
 
is_a: regulation of syringal lignin biosynthetic process
is_a: regulation of syringal lignin biosynthetic process


[GOC:MENGO_TT]


====GO:XXXXXX131:monolignol transport====


GO:XXXXXX131
name: monolignol transport
namespace: biological process
namespace: biological process
def: The directed movement of monolignols to lignification sites during xylogenesis (cell wall development)
def: The directed movement of monolignols to lignification sites during xylogenesis (cell wall development)
is_a:
[GOC:MENGO_TT]
[GOC:MENGO_TT]


Revision as of 11:09, 11 May 2011

Working group

Trudy_5/11/2011

BIOLOGICAL PROCESS ONTOLOGY

GO:XXXXXX106:regulation of lignin biosynthetic process

namespace: biological process

def: Any process that modulates the frequency, rate or extent of cell wall lignin biosynthesis

regulates : GO:0009809: lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX107:positive regulation of lignin biosynthetic process

namespace: biological process

def: Any process that activates or increases the frequency, rate or extent of cell wall cellulose biosynthesis

is_a: GO:XXXXXX: regulation of lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX108:negative regulation of lignin biosynthetic process

namespace: biological process

def: Any process that stops, prevents or reduces the rate or extent of cellulose biosynthesis

is_a: GO:XXXXXX: regulation of lignin biosynthetic process

[GOC:MENGO_TT]

====GO:XXXXXX109:regulation of lignin catabolic process

namespace: biological process

def: Any process that modulates the frequency, rate or extent of cell wall lignin biosynthesis

regulates : GO:0046274: lignin catabolic process

[GOC:MENGO_TT]

GO:XXXXXX110:positive regulation of lignin biosynthetic process

namespace: biological process

def: Any process that activates or increases the frequency, rate or extent of cell wall cellulose biosynthesis

is_a: GO:XXXXXX: regulation of lignin catabolic process

[GOC:MENGO_TT]

GO:XXXXXX111:negative regulation of lignin biosynthetic process

namespace: biological process

def: Any process that stops, prevents or reduces the rate or extent of cellulose biosynthesis

is_a: GO:XXXXXX: regulation of lignin catabolic process

[GOC:MENGO_TT]

GO:XXXXXX112:regulation of lignin catabolic process

namespace: biological process

def: Any process that modulates the frequency, rate or extent of cell wall lignin biosynthesis

regulates : GO:0046274: lignin catabolic process

[GOC:MENGO_TT]

GO:XXXXXX113:positive regulation of lignin biosynthetic process

namespace: biological process

def: Any process that activates or increases the frequency, rate or extent of cell wall cellulose biosynthesis

is_a: GO:XXXXXX: regulation of lignin catabolic process

[GOC:MENGO_TT]

GO:XXXXXX114:negative regulation of lignin biosynthetic process

namespace: biological process

def: Any process that stops, prevents or reduces the rate or extent of cellulose biosynthesis

is_a: GO:XXXXXX: regulation of lignin catabolic process

GO:XXXXXX115:monolignol biosynthetic process

namespace: biological process

def: The chemical reactions and pathways resulting in the formation of monolignol, source materials for biosynthesis of both lignans and lignin

part_of : GO:0009809: lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX116:regulation of monolignol biosynthetic process

namespace: biological process

def: Any process that modulates the frequency, rate or extent of monolignol biosynthesis

regulates: GO:0009809: lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX117:positive regulation of monolignol biosynthetic process

namespace: biological process

def: Any process that activates or increases the frequency, rate or extent of monolignol biosynthesis

is_a: regulation of monolignol biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX118:negative regulation of monolignol biosynthetic process

namespace: biological process

def: Any process that stops, prevents or reduces the rate or extent of monolignol biosynthesis [GOC:MENGO_TT] is_a: regulation of monolignol biosynthetic process

GO:XXXXXX119:p-hydroxyphenyl lignin biosynthetic process

namespace: biological process

def: The chemical reactions and pathways resulting in the formation of p-hydroxyphenyl lignin,

part of : GO:XXXXXXXXX: monolignol biosynthetic process

Synonym: H-lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX120:regulation of p-hydroxyphenyl lignin biosynthetic process

namespace: biological process

def: Any process that modulates the frequency, rate or extent of p-hydroxyphenyl lignin biosynthesis

regulates: GO:0009809: p-hydroxyphenyl -lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX121:positive regulation of p-hydroxyphenyl -lignin biosynthetic process

namespace: biological process

def: Any process that activates or increases the frequency, rate or extent of p-hydroxyphenyl lignin biosynthesis

is_a: regulation of p-hydroxyphenyl -lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX122:negative regulation of p-hydroxyphenyl -lignin biosynthetic process

namespace: biological process

def: Any process that stops, prevents or reduces the rate or extent of p-hydroxyphenyl lignin biosynthesis

is_a: regulation of p-hydroxyphenyl -lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX123:guaiacyl lignin biosynthetic process

namespace: biological process

def: The chemical reactions and pathways resulting in the formation of guaiacyl lignin,

part of : GO:XXXXXXXXX: monolignol biosynthetic process

synonym: G-lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX124:regulation of guaiacyl lignin biosynthetic process

namespace: biological process

def: Any process that modulates the frequency, rate or extent of guaiacyl lignin biosynthesis

regulates: GO:0009809: guaiacyl -lignin biosynthetic process [GOC:MENGO_TT]

GO:XXXXXX125:positive regulation of guaiacyl -lignin biosynthetic process

namespace: biological process

def: Any process that activates or increases the frequency, rate or extent of Any process that modulates the frequency, rate or extent of guaiacyl lignin biosynthesis

is_a: regulation of guaiacyl lignin biosynthetic process [GOC:MENGO_TT]

GO:XXXXXX126:negative regulation of guaiacyl -lignin biosynthetic process

namespace: biological process

def: Any process that stops, prevents or reduces the rate or extent of Any process that modulates the frequency, rate or extent of guaiacyl lignin biosynthesis [GOC:MENGO_TT]

is_a: regulation of guaiacyl -lignin biosynthetic process

[GOC:MENGO_TT]


GO:XXXXXX127:syringal lignin biosynthetic process

namespace: biological process

def: The chemical reactions and pathways resulting in the formation of syringal lignin,

part of : GO:XXXXXXXXX: monolignol biosynthetic process

synonym: syringal lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX128:regulation of syringal lignin biosynthetic process

namespace: biological process

def: Any process that modulates the frequency, rate or extent of syringal lignin biosynthesis [GOC:MENGO_TT]

regulates: GO:0009809: syringal lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX129:positive regulation of syringal lignin biosynthetic process

namespace: biological process

def: Any process that activates or increases the frequency, rate or extent of syringal lignin biosynthesis

is_a: regulation of syringal lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX130:negative regulation of syringal lignin biosynthetic process

namespace: biological process

def: Any process that stops, prevents or reduces the rate or extent of syringal lignin biosynthesis

is_a: regulation of syringal lignin biosynthetic process

[GOC:MENGO_TT]

GO:XXXXXX131:monolignol transport

namespace: biological process

def: The directed movement of monolignols to lignification sites during xylogenesis (cell wall development)

is_a:

[GOC:MENGO_TT] 


GO:XXXXXX132

name: regulation of monolignol transport namespace: biological process def: Any process that modulates the frequency, rate or extent of monolignol transport [GOC:MENGO_TT] 


GO:XXXXXX133

name: positive regulation of monolignol transport namespace: biological process def: Any process that activates or increases the frequency, rate or extent of monolignol transport [GOC:MENGO_TT] 


GO:XXXXXX134

name: negative regulation of monolignol transport namespace: biological process def: Any process that stops, prevents or reduces the rate or extent of monolignol transport 

[GOC:MENGO_TT]



GO:XXXXXX135

name: monolignol radical formation namespace: biological process def: The chemical reactions resulting in the formation of monolignol radical [GOC:MENGO_TT] 


GO:XXXXXX136

name: regulation of monolignol radical formation namespace: biological process def: Any process that modulates the frequency, rate or extent of mannan monolignol radical formation [GOC:MENGO_TT] 


GO:XXXXXX137

name: positive regulation of monolignol radical formation namespace: biological process def: Any process that activates or increases the frequency, rate or extent of monolignol radical formation [GOC:MENGO_TT] 


GO:XXXXXX138

name: negative regulation of monolignol radical formation namespace: biological process def: Any process that stops, prevents or reduces the rate or extent of monolignol radical formation [GOC:MENGO_TT] 


GO:XXXXXX139

name: monolignol polymerization namespace: biological process def: The process of creating monolignol polymers, compounds composed of a large number of component monomers [GOC:MENGO_TT] 


GO:XXXXXX140

name:regulation of monolignol polymerization namespace: biological process def: Any process that modulates the frequency, rate or extent of monolignol polymerization [GOC:MENGO_TT] 


GO:XXXXXX141

name: negative regulation of monolignol polymerization namespace: biological process def: Any process that stops, prevents or reduces the rate or extent of monolignol polymerization [GOC:MENGO_TT] 


GO:XXXXXX142

name: positive regulation of monolignol polymerization namespace: biological process def: Any process that activates or increases the frequency, rate or extent of monolignol polymerization [GOC:MENGO_TT]

Retrieved from "https://wiki.geneontology.org/index.php?title=MENGO_Lignin_degradation&oldid=34912"