Manager 03September2014

Trello Board Link:

https://trello.com/b/IdtTLGEt/go-priorities

Additional Agenda Items

• ECO development? It has been very slow.

Minutes

ECO development

• Rama: protein2go displays ECO code for evidence. It is slow to add.
• David: Is the project still funded?
• Pascale: Submitted 20+ terms with definition back in June. Still haven’t heard anything back from Marcus.
• Suzi: Continue to work with Marcus.

Trello board updates

• Suzi: Trello board - anything needs to be discussed, not completed in the same day, should be added to the Trello board. Take it off when it is completed.

Ontology update (David)

• Triage SF items - Paola almost finish the sourceforge minutes.
• Protege testing - It is working. Still use OBO-edit with OBO file. For more complicated file, convert it to owl file and open it with Protege, and then convert back to OBO.
  • Chris asked why not using Protege all the time.
  • David: OBO editor has better visualization, and is easier to use.
• pattern/template development - get reasoning to work in part-of inference. Sometimes it is difficult, eg., myocardium is part_of heart, but development of myocardium is not part of development of heart.
• Assess PT's plan on MF change - David OS is working on it.
• Cell cycle ontology fixes - Jane introdices phases of cell cycle.. pretty close to be completed.
• protege5 - switch soon
• protein binding - continue to work on it.
• small protein - rama will update at the next call. ubiquitin ligase
• LEGO example - like to use noctura for col 16 data. problem is where to get resource for that.

• Judy - what is the highest priority?

• David: continue to get sourceforget items down, and get
• Suzi - the order of the card should reflect priority. come off when it is done.