Manager 03September2014
On call:
Trello Board Link:
https://trello.com/b/IdtTLGEt/go-priorities
Additional Agenda Items
- ECO development? It has been very slow.
Minutes
ECO development
- Rama: protein2go displays ECO code for evidence. It is slow to add.
- David: Is the project still funded?
- Pascale: Submitted 20+ terms with definition back in June. Still haven’t heard anything back from Marcus.
- Suzi: Continue to work with Marcus.
Trello board updates
- Suzi: Trello board - anything needs to be discussed, not completed in the same day, should be added to the Trello board. Take it off when it is completed.
Ontology update (David)
- Triage SF items - Paola almost finish the sourceforge minutes.
- Protege testing - It is working. Still use OBO-edit with OBO file. For more complicated file, convert it to owl file and open it with Protege, and then convert back to OBO.
- Chris asked why not using Protege all the time.
- David: OBO editor has better visualization, and is easier to use.
- pattern/template development - get reasoning to work in part-of inference. Sometimes it is difficult, eg., myocardium is part_of heart, but development of myocardium is not part of development of heart.
- Assess PT's plan on MF change - David OS is working on it.
- Cell cycle ontology fixes - Jane introdices phases of cell cycle.. pretty close to be completed.
- protege5 - switch soon
- protein binding - continue to work on it.
- small protein - rama will update at the next call. ubiquitin ligase
- LEGO example - like to use noctura for col 16 data. problem is where to get resource for that.
- Judy - what is the highest priority?
- David: continue to get sourceforget items down, and get
- Suzi - the order of the card should reflect priority. come off when it is done.