Manager 20Aug2014: Difference between revisions
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=On call= | =On call= | ||
*Judy, Suzi, Chris, Rama, Pascale, Kimberly | *Judy, Suzi, Chris, Rama, Pascale, Kimberly, David | ||
=Agenda= | =Agenda= | ||
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*Aiming for September 15th deadline, but will likely need a little more time | *Aiming for September 15th deadline, but will likely need a little more time | ||
*Paper focuses on updates and enhancements to the project, also provides overall summary with key info (e.g., contact) | *Paper focuses on updates and enhancements to the project, also provides overall summary with key info (e.g., contact) | ||
==SourceForge Clearance Jamboree== | |||
*Resolved a number of outstanding SourceForge tickets - Paola is compiling the numbers | |||
*By end of week, hopefully all of Val's outstanding tickets will also be resolved | |||
*Related issue - overhaul of Molecular Function | |||
*Ontology editors looked at the proposal and liked much of the proposed changes | |||
*Where would the MF overhaul fit in with ontology development priorities? | |||
*Would be good to have more people trained in ontology development | |||
*Testing out web Protege - long term goal | |||
==Noctua= | |||
*Chris - new release of Noctua | |||
*Most visible change is user login | |||
*Also Noctua annotations are loading into the dev version of AmiGO (will give demo at Barcelona) | |||
*This is very useful as we get more models; curators can search for annotations in dev version of AmiGO | |||
*Chris will contact | |||
=Text Mining== | |||
*Yuling is training an enzymatic activity document classifier (SVM) | |||
*Will investigate feasibility of SVM on PMC corpus for prioritizing papers based on data type |
Revision as of 11:22, 20 August 2014
On call
- Judy, Suzi, Chris, Rama, Pascale, Kimberly, David
Agenda
Trello board
https://trello.com/b/IdtTLGEt/go-priorities
GOC meeting Barcelona
http://wiki.geneontology.org/index.php/2014_Barcelona_GOC_Meeting_Agenda
Conf. Call with Phil Bourne (NIH)
NAR Paper
- Judy reminder about upcoming database issue
- Moni and Harold are working on a draft
- Aiming for September 15th deadline, but will likely need a little more time
- Paper focuses on updates and enhancements to the project, also provides overall summary with key info (e.g., contact)
SourceForge Clearance Jamboree
- Resolved a number of outstanding SourceForge tickets - Paola is compiling the numbers
- By end of week, hopefully all of Val's outstanding tickets will also be resolved
- Related issue - overhaul of Molecular Function
- Ontology editors looked at the proposal and liked much of the proposed changes
- Where would the MF overhaul fit in with ontology development priorities?
- Would be good to have more people trained in ontology development
- Testing out web Protege - long term goal
=Noctua
- Chris - new release of Noctua
- Most visible change is user login
- Also Noctua annotations are loading into the dev version of AmiGO (will give demo at Barcelona)
- This is very useful as we get more models; curators can search for annotations in dev version of AmiGO
- Chris will contact
Text Mining=
- Yuling is training an enzymatic activity document classifier (SVM)
- Will investigate feasibility of SVM on PMC corpus for prioritizing papers based on data type