Difference between revisions of "Manager 3June2015"
From GO Wiki
(Created page with "=Agenda= ===Welcome to Melanie=== * She is the new GO project lead at UniProt ==GAF2.1 (addition of pipe/comma to With/From column) (Rama)== * I have put together some specs...")
Revision as of 10:12, 2 June 2015
Welcome to Melanie
- She is the new GO project lead at UniProt
GAF2.1 (addition of pipe/comma to With/From column) (Rama)
- I have put together some specs to make this happen.
- Documentation on the GOC website for GAF 2.1- http://geneontology.org/page/go-annotation-file-gaf-format-21
- Annotation guidelines for use of pipe and comma is pending
- test file for checking scripts is available in github
- protein2GO is almost ready to make this option public
- We want to announce this version on July 1st.
Are there any concerns?
Author feedback form
- We have been asked several times about the quality of our annotations
- Paul T mentioned that, at the Synapse meeting, an author said the annotations made from his paper were not accurate.
- How about we send a form to authors and ask if the annotations made from their papers are correct or not?
Master GAF file
- Many of our users who want all the annotations for all taxons grab the UniProt file. We should be providing a master GAF file with all annotations