Manager Call 2020-02-12: Difference between revisions
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Is there anything we can do to help make releases easier ? | Is there anything we can do to help make releases easier ? | ||
==Status of Projects== | ==Status of 'high priority' Projects== | ||
Google spreadsheet of the projects: https://docs.google.com/spreadsheets/d/1lZO0cf64_eufimUhEdcpiZMGEmvF6_7BW-GQWBXR3Mw/edit#gid=199463565 | |||
=== | ===AmiGO search fixes === | ||
Not yet prioritized but the PIs asked to evaluate work to decide whether this will be prioritized | |||
Seth/Chris: evaluation of time - prioritization - resources | |||
===Legacy infrastructure === | ===2.2 Aggregate Statistics for releases=== | ||
===2.3 Legacy infrastructure === | |||
Seth/Chris: next step? | Seth/Chris: next step? | ||
===Migration of MGI and WormBase annotations to Noctua=== | ===3.1 Migration of MGI and WormBase annotations to Noctua=== | ||
Week of Feb 24 hackaton will address that: | |||
===4.1 GO-CAM ShEx specification v1.0 completion=== | |||
===4.2 Integrating validation (AKA GO rules) into Minerva=== | |||
===4.3 Noctua/GO-CAM Curator Documentation: curation philosophy=== | |||
* Done ? Do we need to add links to this ? | |||
===4.4: Documentation: curation how-to=== | |||
* which relations to choose when - this is the main thing curators ask about | |||
-> Kimberly in progress | |||
===4.8 Pathways2GO, including making models *activity-centric*=== | |||
===5.1 Deploy Noctua Search (as landing page)=== | |||
===5.3 Noctua onto "production" footing=== | |||
===8.7 Improve GO API & support the GO-CAM + documentation=== | |||
==Other discussion points== | ==Other discussion points== |
Revision as of 09:40, 12 February 2020
Agenda
- Agenda: Suzi
- Minutes: Seth
- Present:
- Regrets:
Discussion points
Upcoming Meetings
Caltech f2f, 24-28 Feb
GO meeting Paris, 11 (Users), 12-14 (Main), 15(SAB) May
GO meeting Baltimore, week of 5th Oct
Discussion
Release delays
Is there anything we can do to help make releases easier ?
Status of 'high priority' Projects
Google spreadsheet of the projects: https://docs.google.com/spreadsheets/d/1lZO0cf64_eufimUhEdcpiZMGEmvF6_7BW-GQWBXR3Mw/edit#gid=199463565
AmiGO search fixes
Not yet prioritized but the PIs asked to evaluate work to decide whether this will be prioritized Seth/Chris: evaluation of time - prioritization - resources
2.2 Aggregate Statistics for releases
2.3 Legacy infrastructure
Seth/Chris: next step?
3.1 Migration of MGI and WormBase annotations to Noctua
Week of Feb 24 hackaton will address that:
4.1 GO-CAM ShEx specification v1.0 completion
4.2 Integrating validation (AKA GO rules) into Minerva
4.3 Noctua/GO-CAM Curator Documentation: curation philosophy
- Done ? Do we need to add links to this ?
4.4: Documentation: curation how-to
- which relations to choose when - this is the main thing curators ask about
-> Kimberly in progress
4.8 Pathways2GO, including making models *activity-centric*
5.1 Deploy Noctua Search (as landing page)
5.3 Noctua onto "production" footing
8.7 Improve GO API & support the GO-CAM + documentation
Other discussion points
Loading viral and bacterial entries in NEO
https://github.com/geneontology/neo/issues/49 Prioritize + assign someone
Isoforms not loaded in AmiGO
Was there a decision NOT to include UniProt isoforms in AmiGO ? https://github.com/geneontology/go-site/issues/1105
Also - should we provide single files for each organism, rather than splitting by entity type ? http://current.geneontology.org/products/pages/downloads.html