Manager Call 2020-03-04

From GO Wiki
Revision as of 12:03, 4 March 2020 by David (talk | contribs) (→‎Agenda)
Jump to navigation Jump to search
The printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.

Agenda

  • Agenda: Laurent-Philippe
  • Minutes: David
  • Present: David, Paul T, Seth, Laurent-Philippe, Kimberly, Pascale
  • Regrets: Judy

Discussion points

Caltech f2f, 24-28 Feb

Summary

  • One deliverable from the meeting was GPAD/GPI 2.0 specs.
  • A Google doc with the proposed changes and some comments is available for people to review.
  • There are a few points where we still need a final decision (marked in red).

GO meeting Paris

Page ready to be shared: http://wiki.geneontology.org/index.php/2020_Paris_GOC_Meeting_Logistics Registration here: https://www.eventbrite.com/e/gene-ontology-main-meeting-tickets-97870099101

Pasteur: bioinformatics hub to be cited as co-organizer of the GO User Meeting.

Discussion

Noctua/NEO

  • Loading UniProt Viral + bacterial GPI: This came up again from the multi-organism working group. They want to start making GO-CAM models. Can the loading of the GPI file be prioritized and assigned?

Paper identifying missing 'is_a' relations

David https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btaa106/5739437

Some missing relations are not: is it a version problem ? or maybe they aren't using the inferred version of the ontology ?

Is there any missing link that could be useful for the ontology ?

Non-GO editors people making PR in the ontology tracker

https://github.com/geneontology/go-ontology/issues/17091


Isn't our policy that *only* GO editors work on the ontology ? Or do we want to allow some other users to make PRs?

Retrieved from "https://wiki.geneontology.org/index.php?title=Manager_Call_2020-03-04&oldid=77604"