Manager Call 2020-04-08

From GO Wiki
Revision as of 07:50, 7 April 2020 by Pascale (talk | contribs)
Jump to navigation Jump to search

Agenda

  • Agenda: Seth
  • Minutes: Pascale
  • Present:
  • Regrets:

Discussion points

MGI and WB Imports

Status updates

  • WB
    • Alex will work on preparing a test GPAD file with annotation history for WB - hopes to have it on the GOA ftp site soon
  • MGI
  • Have a periodic follow-up call to review progress?

Xenbase into GO main

  • Malcolm already attends Judy's meeting, TO-DO: invite him (and/or xenbase reps) to GO-annotation calls. Need to make sure XB maintains own annotations, is in line with GO SOPs.

Pathway Genome Databases and the Alliance

See Chris' email

  • Explore bringing in other existing curated pathways in a similar way that we did for Reactome
  • Follow-up to Alliance call with Peter K. two weeks ago?


Users versus group-contacts.yaml

https://github.com/geneontology/go-site/blob/master/metadata/group-contacts.csv https://github.com/geneontology/go-site/blob/master/metadata/groups.yaml

See discussion in https://github.com/geneontology/go-site/pull/1447

  • `users` contain all users, including people not on the project anymore
  • Not sure where affiliations come from for eg Cath Brooksbank listed as GO_central).
  • `users` does not have GH handles
  • `group-contacts` includes only active members


Publications

  • Val's matrix paper is available as a draft
  • Authors have reviewed and made comments
  • Do the GO PIs (besides Chris who is last author) also need to read?