Manager Call 2020-04-29: Difference between revisions
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3-days workshop ran by Ruth and Pascale | 3-days workshop ran by Ruth and Pascale | ||
Attendees: Colin, Astrid, Kimberly, and curators: | Attendees: Colin, Astrid, Kimberly, and curators: | ||
Valerie Wood | * Valerie Wood | ||
Helen Attrill | * Helen Attrill | ||
Cristina Casals (Swiss-Prot) | * Cristina Casals (Swiss-Prot) | ||
Penelope Garmiri (UniProt) | * Penelope Garmiri (UniProt) | ||
Michele Magrane (UniProt) | * Michele Magrane (UniProt) | ||
Teshome Dagne Mulugeta (NTNU) | * Teshome Dagne Mulugeta (NTNU) | ||
Dariia Bykova | * Dariia Bykova | ||
Sandra Orchard | * Sandra Orchard | ||
Paul Denny (UniProt) | * Paul Denny (UniProt) | ||
Niels Velthuijs (Colin's group) | * Niels Velthuijs (Colin's group) | ||
Birgit Meldal (only Wed PM) | * Birgit Meldal (only Wed PM) | ||
* The main aim is to test and get feedback on the guidelines we are writing up to match the new transcription factor branch of the ontolgy https://docs.google.com/document/d/1NwRfJQ5fQ7_BVpJG9eh-gKpgaTHoGHeq6XWOEoHdEGk/edit# | |||
Plan is to sent to biorxiv and publish in a special GREEKC issue of BBA that will probably be out in early 2021 | * Plan is to sent to biorxiv and publish in a special GREEKC issue of BBA that will probably be out probably in early 2021. | ||
==Following up on previous items== | ==Following up on previous items== | ||
Revision as of 01:56, 29 April 2020
Agenda
- Agenda: Kimberly
- Minutes: Pascale
- Present:
- Regrets:
Review May Consortium Meeting agenda
- We are within a month of the May consortium meetings
- Need to start firming up the agenda so people can start planning their schedules and working on presentations
Transcription workshop this week
3-days workshop ran by Ruth and Pascale Attendees: Colin, Astrid, Kimberly, and curators:
- Valerie Wood
- Helen Attrill
- Cristina Casals (Swiss-Prot)
- Penelope Garmiri (UniProt)
- Michele Magrane (UniProt)
- Teshome Dagne Mulugeta (NTNU)
- Dariia Bykova
- Sandra Orchard
- Paul Denny (UniProt)
- Niels Velthuijs (Colin's group)
- Birgit Meldal (only Wed PM)
- The main aim is to test and get feedback on the guidelines we are writing up to match the new transcription factor branch of the ontolgy https://docs.google.com/document/d/1NwRfJQ5fQ7_BVpJG9eh-gKpgaTHoGHeq6XWOEoHdEGk/edit#
- Plan is to sent to biorxiv and publish in a special GREEKC issue of BBA that will probably be out probably in early 2021.
Following up on previous items
Noctua
ACTION ITEM: : Consider starting a working group to discuss external ontologies in Noctua and GO more generally with the goal of developing consistent representation (as much as possible) and an SOP to give to groups onboarding. Will discuss further on the GO-CAM specs call, particularly with Jim B.
GAF2.2
What's the next step - create a project ?
XenBase onboarding status
Seth - update
ECO and IEAs
- Many Evidence codes do not match to the 3-letter evidence codes that we would map to
- ACTION: Pascale to contact Michelle to set up some virtual meeting to discuss some issues we'd like to see fixed