Managers 27Aug08: Difference between revisions

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==Discussion Items==
==Discussion Items==
'''ECO curation'''<br>From Chris (seconded by Suzi): We urgently need a minimal level of curation for ECO. It's imperative that we have a computable representation of evidence for an annotation.
'''ECO curation'''<br>From Chris (seconded by Suzi): We urgently need a minimal level of curation for ECO. It's imperative that we have a computable representation of evidence for an annotation.<br>
''GO Consortium Meeting Minutes'''<br>
'''GO Consortium Meeting Minutes'''<br>
The Minutes from the Salt Lake City GO Consortium Meeting have not yet been sent to the list for checking and subsequent addition to the website. Should we ask Fiona to do this as soon as possible?<br>
The Minutes from the Salt Lake City GO Consortium Meeting have not yet been sent to the list for checking and subsequent addition to the website. Should we ask Fiona to do this as soon as possible?<br>
(Jennifer)<br>
(Jennifer)<br>

Revision as of 05:20, 27 August 2008

GO Managers, Weds. August 27th, 2008 8a.m. PDT, 9a.m. MDT, 10a.m. CDT, 11a.m. EDT, 4p.m. BST

Agenda/chair: rota says Chris; Midori volunteers if he doesn't

Minutes: rota says David, but he did last call (for Chris, so we suggest he does minutes today)

Present:

Action items from August 13

  • David and Tanya: Send out the e-mail for the F-P links. [DONE, 8-13-08]
  • Mike:When we support the 17 column GA, and the gene association files are submitted with 17 columns, will mike's system continue to support a 16-column file?
  • Jen: Write to ask Fiona if she is happy to head up a PAG annotation jamboree if David will also help. [DONE] Fiona says she is happy to take the lead if David helps. She is also going to write to Rama to ask if she will be there this year.

Discussion Items

ECO curation
From Chris (seconded by Suzi): We urgently need a minimal level of curation for ECO. It's imperative that we have a computable representation of evidence for an annotation.
GO Consortium Meeting Minutes
The Minutes from the Salt Lake City GO Consortium Meeting have not yet been sent to the list for checking and subsequent addition to the website. Should we ask Fiona to do this as soon as possible?
(Jennifer)
Annotation Quality Control: A file is being created that will enable a new annotation check. The check is to see that gene products have not been annotated to GO terms that are inappropriate for the species of origin of the gene product. tab-delimited file
The next step in testing this system would be to give the file to Ensembl to let them test whether it is easy for them to check annotations using the file, and how many wrong annotations they can remove using it. Would everyone be happy for the file to be passed on, on the understanding that it is not for release at this time?
(From Jennifer)


Next Meeting

10 September

Agenda: Chris?

Minutes: Midori

Summary of action items

Back to minutes list