Manual - Jennifer (Archived): Difference between revisions

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Here are the steps that I can think of in doing manual annotation:
[[Category:Annotation Archived]]
Current latest:


 
[[Image:literature_original-4thMay.ppt]]
1) Find a paper that shows the function of a gene product or the biological process or cellular location in which it acts.
[[Image:literature_original-4thMay.png]]
 
2) Find the accession number of the gene product, e.g. from UniProt or GenBank.
 
3) Find the GO term that is appropriate using AmiGO.
 
4) Choose the evidence code for the experiment that was done. (See evidence code docs.)
 
5) Note down the pubmed id for the paper.
 
6) Put these in a spreadsheet with the appropriate headings.  
(Shall we provide a spreadsheet with the headings?
 
7) Send to the GO Consortium.  
 
 
Q) Shall we also include all the other fields or will this get very complicated?

Latest revision as of 11:35, 14 March 2019