May2010 ontology report
Ontology Development Report - May 2010
I. Ontology Development
Tracker
- Items opened: 75
- Items closed: 65
- Items still open: 245
- assigned: 135
- unassigned: 110
Completed content items
- cc x cc (part_of only) added to live ontology
- Various SourceForge items
Content items in progress
- Lots of preparation for annotation camp [all]
- Transcription revamp (BP & MF) in preparation for transcription meeting in Spain, June [David & Karen]
- F-P links between transporter activities and transport processes almost finished [David & Tanya]
- BP-BP cross products for part_of links [David & Tanya]
- Signaling- working through the existing signaling terms to make them more consistent and fill in any gaps. [Becky]
- More work on kidney terms [Becky, David, Yasmin, Doug]
- Chemical_terms_in_GO - continuing to edit the GOCHE ontology (chemicals in GO) [David, Tanya, Jane & Harold]
- Adding lots of transmembrane transport terms for Val's goslim mappings. [Becky]
- Standardizing the GO terms that contain the word 'during'. [David & Tanya]
- Quality control continues as usual - reports generated by Chris (cronjobs)
Publications
- Case studies for publication on "revisability" of GO, proposed and coordinated by Sabina Leonelli - in progress (Midori, Jane, Alex, Karen C)
Anything else
- GOCHE meeting planned late July in CA