Difference between revisions of "Mining Process Function Links from Reactome"

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== Methods ==
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I used the reactome biopax exports. I took a connection between a biopax pathway and a reaction with corresponding GO xrefs to be evidence of a potential P->F link
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== Files ==
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* [http://www.geneontology.org/scratch/fp-links/ go/scratch/fp-links/] -- scratch directory for all process function links
 
* [http://www.geneontology.org/scratch/fp-links/ go/scratch/fp-links/] -- scratch directory for all process function links
 
** [http://www.geneontology.org/scratch/fp-links/reactome-all.txt go/scratch/fp-links/reactome-all.txt] -- table with ALL reactome sourced P->F links
 
** [http://www.geneontology.org/scratch/fp-links/reactome-all.txt go/scratch/fp-links/reactome-all.txt] -- table with ALL reactome sourced P->F links

Revision as of 13:49, 24 September 2008



Methods

I used the reactome biopax exports. I took a connection between a biopax pathway and a reaction with corresponding GO xrefs to be evidence of a potential P->F link

Files