Mock-ups of new GOC Annotation pages (Deprecated): Difference between revisions
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[[Category:Annotation]] | |||
This page lists the content of the website overhaul done in 2011. Note that most links are dead. | |||
Drafts of new GO Annotation pages are being prepared for the GO Consortium website. These will eventually replace and improve upon the information provided by current documentation pages listed below: | Drafts of new GO Annotation pages are being prepared for the GO Consortium website. These will eventually replace and improve upon the information provided by current documentation pages listed below: | ||
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-- [http://www.geneontology.org/GO.evidence.shtml Evidence Codes] | -- [http://www.geneontology.org/GO.evidence.shtml Evidence Codes] | ||
--[[assigned_by]] | -- [[With field]] | ||
--[[Annotation assigned_by]] | |||
--[[Annotation Extension]] | |||
[[Introduction to the GO Consortium annotation set]] | [[Introduction to the GO Consortium annotation set]] | ||
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The Annotation Quality Control section of: http://www.geneontology.org/GO.format.annotation.shtml could be displayed as a separate page, and include a link to the Annotation QC page that Amelia has now generated - http://www.geneontology.org/GO.annotation_qc.shtml | The Annotation Quality Control section of: http://www.geneontology.org/GO.format.annotation.shtml could be displayed as a separate page, and include a link to the Annotation QC page that Amelia has now generated - http://www.geneontology.org/GO.annotation_qc.shtml | ||
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[[GO annotation fields required for correct display]] | |||
[[Technical Priorities for Annotation Groups]] |
Revision as of 18:36, 6 March 2020
Redirect to:
This page lists the content of the website overhaul done in 2011. Note that most links are dead.
Drafts of new GO Annotation pages are being prepared for the GO Consortium website. These will eventually replace and improve upon the information provided by current documentation pages listed below:
- Annotation Guide CONTENT MOVED TO: Introduction to the GO Consortium annotation set
- Evidence Codes Include Flow Chart? Need to include new PAINT evidence types. State objective of concordance with ECO?
- Conventions CONTENT MOVED TO: Qualifiers,Database Objects, References
- SOPs CONTENT MOVED TO: Guidelines for literature-based curation, Guidelines for electronic annotation methods, Guidelines for manual, sequence based curation, How External Communities can contribute annotations to the GO Consortium
- QC Checks. Perhaps the Annotation Quality Control section of: File Format could be displayed in this page
- GO Reference Collection As this lists GO_REFs, which are just one of the references allowed in the GO annotation format, perhaps this could be linked to from a new References page?
New Annotation Documentation Layout
Perhaps we could have an introduction to a generic GO annotation, with tabs displaying documentation for each of the fields; including:
-- Qualifiers
-- References
-- With field
Introduction to the GO Consortium annotation set
How External Communities can contribute annotations to the GO Consortium
-- Guidelines for literature-based curation
-- Guidelines for electronic annotation methods
-- Guidelines for manual, sequence based curation
GO Annotation Usage Guidelines
I realize that its not a page for the annotation group, however should one be created that deals with how to requesting new GO terms? Suggestions for content here: Requesting new GO terms
The Annotation Quality Control section of: http://www.geneontology.org/GO.format.annotation.shtml could be displayed as a separate page, and include a link to the Annotation QC page that Amelia has now generated - http://www.geneontology.org/GO.annotation_qc.shtml