Difference between revisions of "Muscle biology- Muscle Implementation after Content Meeting"

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(18th September, 2007)
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*satellite cell compartement self-renewal involved in skeletal muscle regeneration needs a IS_A complete
 
*satellite cell compartement self-renewal involved in skeletal muscle regeneration needs a IS_A complete
 
*We need definitions for:<br>myoblast cell fate commitment in head<br>myoblast cell fate commitment in trunk<br>regulation of branchiomeric skeletal muscle development<br>negative regulation of branchiomeric skeletal muscle development<br>positive regulation of branchiomeric skeletal muscle development<br>regulation of somitomeric trunk muscle development<br>negative regulation of somitomeric trunk muscle development<br>positive regulation of somitomeric trunk muscle development
 
*We need definitions for:<br>myoblast cell fate commitment in head<br>myoblast cell fate commitment in trunk<br>regulation of branchiomeric skeletal muscle development<br>negative regulation of branchiomeric skeletal muscle development<br>positive regulation of branchiomeric skeletal muscle development<br>regulation of somitomeric trunk muscle development<br>negative regulation of somitomeric trunk muscle development<br>positive regulation of somitomeric trunk muscle development
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==19th September, 2007==
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prof. Reggiani came and helped for definition of muscle contraction terms. We have defined almost all "muscle contraction" terms (he will come on Friday to  get the work finished).<br> We have made these changes:<br>
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*Added definitions for: muscle contraction, smooth muscle contraction, skeletal muscle contraction
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To DO:
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*check all terms of "regulation of muscle contraction"

Revision as of 01:56, 19 September 2007

12th September, 2007

Participants: Erika Feltrin, Jennifer Deegan

We went through about two thirds of the list on the google spreadsheet and figured out what to do about each item.


13th September, 2007

Participants: Erika Feltrin, Jennifer Deegan

We went through the descendants of skeletal muscle regeneration and fixed the graph and definitions. We made the terms is_a complete as we went along.

We made a new term called cell-cell fusion as an is_a parent for the myoblast fusion term. Cell-cell fusion has been placed as a cellular process.

14th September, 2007

Participants: Erika Feltrin, Jennifer Deegan

We worked on:

  • descendents of contractile fiber part
  • descendents of sarcoplasmic reticulum terms
  • descendents of muscle regeneration terms
  • cell fusion

We have now checked all the definitions and graphs for all of these terms and they are correct apart for 2 or 3 small outstanding questions. The questions are listed on the google spreadsheet and Erika and I have identified experts who can help us with them.

18th September, 2007

Participants: Erika Feltrin, Jennifer Deegan

  • Terms with myotube, myoblast or myofibre in the name were given cell definitions and synonyms.
  • We moved myotube development under muscle fibre development.
  • Inserted def for satellite cell in all terms covering satellite cell.
  • Checked defs for muscle regeneration terms except for EF:0014815 (a term covering growth factor in muscle regeneration.)
  • Wrote to David to ask about a skype call to cover striated muscle grouping.

Erika in the afternoon

  • EF:0014815 has a definition
  • ADDED two new terms:
    regulation of satellite cell activation involved in skeletal muscle regeneration
    positive regualtion of satellite cell activation involved in skeletal muscle regeneration
    MOVED EF:0014815 as a is_a of positive regulation of satellite cell activation involved in skeletal muscle regeneration
  • MOVED myblast migration involved in skeletal muscle regeneration is_a child of myoblast migration
  • ADDED a new term: satellite cell activation is_a cell activation
  • MOVED satellite cell activation involved in skeletal muscle regeneration is_a child satellite cell activation

HOMEWORKS:

  • WHAT IS A MUSCLE CELL? Check the muscle cell development structure
  • axon regeneration at NMJ?We need a defintion
  • satellite cell compartement self-renewal involved in skeletal muscle regeneration needs a IS_A complete
  • We need definitions for:
    myoblast cell fate commitment in head
    myoblast cell fate commitment in trunk
    regulation of branchiomeric skeletal muscle development
    negative regulation of branchiomeric skeletal muscle development
    positive regulation of branchiomeric skeletal muscle development
    regulation of somitomeric trunk muscle development
    negative regulation of somitomeric trunk muscle development
    positive regulation of somitomeric trunk muscle development

19th September, 2007

prof. Reggiani came and helped for definition of muscle contraction terms. We have defined almost all "muscle contraction" terms (he will come on Friday to get the work finished).
We have made these changes:

  • Added definitions for: muscle contraction, smooth muscle contraction, skeletal muscle contraction


To DO:

  • check all terms of "regulation of muscle contraction"