Neurobiology Project: Difference between revisions
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===Summary=== | ===Summary=== | ||
To expand and improve the GO biological processes terms and annotations for neurological processes including the core cellular processes for synaptic transmission, through to some of the higher order brain processes like cognition, and to fully augment GO cc with those terms in Neurological Information Framework (NIF) | To expand and improve the GO biological processes terms and annotations for neurological processes including the core cellular processes for synaptic transmission, through to some of the higher order brain processes like cognition, and to fully augment GO cc with those terms in Neurological Information Framework (NIF) | ||
===Personnel=== | ===Personnel=== | ||
====GO==== | ====GO==== | ||
Paola | |||
====External experts==== | |||
==== | |||
*Dr. John Chua (GWDG) - '''main contact''' | *Dr. John Chua (GWDG) - '''main contact''' | ||
*Dr. Mario Albrecht (Max Planck Institute) | *Dr. Mario Albrecht (Max Planck Institute) | ||
| Line 19: | Line 19: | ||
*Maryann Martone (NIF, University of California) | *Maryann Martone (NIF, University of California) | ||
** Neurological cell components | ** Neurological cell components | ||
===Timeline=== | ===Timeline=== | ||
| Line 28: | Line 29: | ||
#Implementation of new terms | #Implementation of new terms | ||
#Annotations to new terms | #Annotations to new terms | ||
===SF items=== | |||
* [https://sourceforge.net/tracker/?func=detail&aid=3290890&group_id=36855&atid=440764 Synaptic membrane] | |||
* [https://sourceforge.net/tracker/?func=detail&aid=3290896&group_id=36855&atid=440764 Dendritic spine maintenance] | |||
* [https://sourceforge.net/tracker/?func=detail&aid=3294329&group_id=36855&atid=440764 General term for amyloid formation] | |||
* [https://sourceforge.net/tracker/?func=detail&aid=3300906&group_id=36855&atid=440764 Beta-amyloid formation] | |||
* [https://sourceforge.net/tracker/?func=detail&aid=3297427&group_id=36855&atid=440764 Dorsal interneuron caudal and rostral axon projection] | |||
* [https://sourceforge.net/tracker/?func=detail&aid=3297548&group_id=36855&atid=440764 Lateral motor column neuron migration] | |||
Revision as of 13:50, 7 June 2011
Summary
To expand and improve the GO biological processes terms and annotations for neurological processes including the core cellular processes for synaptic transmission, through to some of the higher order brain processes like cognition, and to fully augment GO cc with those terms in Neurological Information Framework (NIF)
Personnel
GO
Paola
External experts
- Dr. John Chua (GWDG) - main contact
- Dr. Mario Albrecht (Max Planck Institute)
Main interest is in biological processes concerning the synapse, particularly the presynaptic active zone (human). See their recent review below for examples of genes and processes.
The architecture of an excitatory synapse. Chua JJ, Kindler S, Boyken J, Jahn R. J Cell Sci. 2010 Mar 15;123(Pt 6):819-23. Review. PMID:20200227
- Maryann Martone (NIF, University of California)
- Neurological cell components
Timeline
- Preliminary phone conference
- Collect SF items
- First draft of new terms
- Ontology content meeting with experts
- Second draft of new terms
- Implementation of new terms
- Annotations to new terms