Neurobiology Project: Difference between revisions

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* [https://sourceforge.net/tracker/?func=detail&aid=2891344&group_id=36855&atid=440764 New cc terms from NIFSTD - subcellular]
* [https://sourceforge.net/tracker/?func=detail&aid=2891344&group_id=36855&atid=440764 New cc terms from NIFSTD - subcellular]
* [https://sourceforge.net/tracker/?func=detail&aid=2891355&group_id=36855&atid=440764 More new cc terms from NIFSTD - other]
* [https://sourceforge.net/tracker/?func=detail&aid=2891355&group_id=36855&atid=440764 More new cc terms from NIFSTD - other]
* [https://sourceforge.net/tracker/?func=detail&aid=3198568&group_id=36855&atid=440764 Add axon pruning as synonym for neuron remodeling]
* [https://sourceforge.net/tracker/?func=detail&aid=3204710&group_id=36855&atid=440764 Neurotransmitter receptor catabolic process]
* [https://sourceforge.net/tracker/?func=detail&aid=3284647&group_id=36855&atid=440764 Retinal ganglion cell axon formation +regn. terms]
* [https://sourceforge.net/tracker/?func=detail&aid=3285412&group_id=36855&atid=440764 Nerve-nerve transmission]
* [https://sourceforge.net/tracker/?func=detail&aid=3290890&group_id=36855&atid=440764 Synaptic membrane]
* [https://sourceforge.net/tracker/?func=detail&aid=3290890&group_id=36855&atid=440764 Synaptic membrane]
* [https://sourceforge.net/tracker/?func=detail&aid=3290896&group_id=36855&atid=440764 Dendritic spine maintenance]
* [https://sourceforge.net/tracker/?func=detail&aid=3290896&group_id=36855&atid=440764 Dendritic spine maintenance]
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* [https://sourceforge.net/tracker/?func=detail&aid=3325195&group_id=36855&atid=440764 Request GO terms for synapse assembly]
* [https://sourceforge.net/tracker/?func=detail&aid=3325195&group_id=36855&atid=440764 Request GO terms for synapse assembly]
* [https://sourceforge.net/tracker/?func=detail&aid=3341984&group_id=36855&atid=440764 Is an apical dendrite a part of apical part of cell?]
* [https://sourceforge.net/tracker/?func=detail&aid=3341984&group_id=36855&atid=440764 Is an apical dendrite a part of apical part of cell?]
* [https://sourceforge.net/tracker/?func=detail&aid=3367659&group_id=36855&atid=440764 Synaptogenesis and protein establishment localization term]





Revision as of 13:42, 1 August 2011

Summary

To expand and improve the GO biological processes terms and annotations for neurological processes including the core cellular processes for synaptic transmission, through to some of the higher order brain processes like cognition, and to fully augment GO cc with those terms in Neurological Information Framework (NIF)


Personnel

GO

  • David H
  • Tanya
  • David O-S
  • Alex
  • Chris
  • Paola

External experts

  • Dr. John Chua (GWDG) - main contact
  • Dr. Mario Albrecht (Max Planck Institute)

Main interest is in biological processes concerning the synapse, particularly the presynaptic active zone (human). See their recent review below for examples of genes and processes.

The architecture of an excitatory synapse.
Chua JJ, Kindler S, Boyken J, Jahn R.
J Cell Sci. 2010 Mar 15;123(Pt 6):819-23. Review.
PMID:20200227
  • Maryann Martone (NIF, University of California)
    • Neurological cell components

Timeline

  1. Preliminary phone conference
  2. Collect SF items
  3. First draft of new terms
  4. Ontology content meeting with experts
  5. Second draft of new terms
  6. Implementation of new terms
  7. Annotations to new terms


SF items


Back to Ontology Development main page