OBO-Edit: OBO-Edit 2.0 Feature Request Prioritization: Difference between revisions

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** '''Summary''' - Add load/save filter buttons in the custom filter configuration screen of the verification manager
** '''Summary''' - Add load/save filter buttons in the custom filter configuration screen of the verification manager
** '''Estimated Time''' - 1 day
** '''Estimated Time''' - 1 day
* [http://sourceforge.net/tracker/index.php?func=detail&aid=1672096&group_id=36855&atid=418260 1672096 - importing ontologies and caching]
** '''Summary''' - Add a mechanism for locally caching ontologies imported from a URL
** '''Estimated Time''' - 1 week
** '''Notes''' - This is essential for cross product projects and is needed by Phenote

Revision as of 12:43, 26 July 2007

Possible Items

  • 1756995 - additional info in ontology editor panel
    • Summary : Suggestion that we add a way to show additional term information, such as synonyms, definition, etc. right in the ontology editor panel. This would probably be implemented as a general system where the summary info can be manipulated with the scripting language (with some easy presets for people who don't want to mess with that).
    • Estimated Time : 1 - 3 weeks
  • 1755435 - verification plugin synonym options
    • Summary : Add various quick fixes for the synonym text verification check
    • Estimated Time: 1 week
    • Special Issues : This feature request suggests that one of the fixes include the ability to change synonym scope, which in turn suggests that Jane thinks that the synonym check is taking synonym scope into account. Which it is not. To implement the expected behavior, I may need to change the basic functionality of the synonym check.
  • 1754279 - Webcollaboration
    • Summary : Asking for some kind of (built-in?) web collaboration from OBO-Edit
    • Estimated Time : < 1 day - 3 years
    • Special Issues : We need to figure out what this user needs, and what we think is reasonable for us to pursue. This could be done just by educating this users about the existing collaboration possibilities via the history file mechanism (and maybe improving that mechanism to make it easier to use). On the other hand, we could implement an entire web-based OBO-Edit. A larger discussion is needed.
  • 1753339 - graph editor
    • Summary : Jen wants to disable automatic centering of the focused term in "no animations" mode
    • Estimated Time : < 1 day
  • 1748284 - adding information about number of terms
    • Summary : Add some summary fields at the top of an OBO file to show how many terms are in each category
    • Estimated Time : < 1 day, but...
    • Special Issues : This just won't work. In general, an OBO ontology isn't contained within a single file. A user might decide to load 10 files, 3 of which have terms defined in a certain category, and this header information is useless. We need to know more about why this feature is being requested; maybe there is some way to give this users what he/she wants in a non-broken way.
  • 1745864 - binning of anonymous terms in display
    • Summary : Remove anonymous terms from the display and add an "anonymous" grouping to the term editor panel where anonymous terms are displayed (similar to the "Obsolete" grouping for obsolete terms)
    • Estimated Time : 2 - 4 days
    • Note : This is essential for many cross-product projects
  • 1730961 - adding obsolete as static synonym category
    • Summary : Add a special synonym category that's present in every ontology called "Obsolete". When a synonym is added to a "consider" or "replaced_by" term as the result of obsoletion, mark that that synonym with the "Obsolete" category
    • Estimated Time : 1 - 3 days
    • Special Issues : Many people (like Midori) hate this idea because of the possibility that it provides redundant functionality to the consider/replaced_by mechanism
  • 1698351 - namespace
    • Summary - Add a quick-fix for missing namespaces
    • Estimated Time - 1 - 3 days
  • 1680238 - Extended definitions
    • Summary - Add a way to see the definitions for all the is_a parents of the currently selected term
    • Estimated Time - 1 - 5 days (see Issues)
    • Special Issues - The estimate above is for building a stand-alone component to do this. But if we do [1] we get this request for free, because we can show definitions (and anything else we want) in the DAG Viewer or the Graph DAG Viewer.
  • 1672096 - importing ontologies and caching
    • Summary - Add a mechanism for locally caching ontologies imported from a URL
    • Estimated Time - 1 week
    • Notes - This is essential for cross product projects and is needed by Phenote