Difference between revisions of "OEWG 20090512"

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(Discussion items)
(Discussion items)
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*** But - other people don't have this issue, so probably not.
 
*** But - other people don't have this issue, so probably not.
 
** Amina will try to look into issue this week.
 
** Amina will try to look into issue this week.
 +
  
 
* Some filters give wrong answers unless reasoner turned on
 
* Some filters give wrong answers unless reasoner turned on
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** David: Ideal behavior - block these searches if reasoner not on + give warning that reasoner must be turned on for them to work.
 
** David: Ideal behavior - block these searches if reasoner not on + give warning that reasoner must be turned on for them to work.
 
** Amina will look in to fixing this week
 
** Amina will look in to fixing this week
 +
  
 
* Feature request - Check/auto-update for when alt_id turns up in a consider or replaced_by tag.
 
* Feature request - Check/auto-update for when alt_id turns up in a consider or replaced_by tag.
 
** Should we update automatically? Or perhaps have a verification check?
 
** Should we update automatically? Or perhaps have a verification check?
 
*** General agreement that it should be automatic - having a check being excessive paranoia.
 
*** General agreement that it should be automatic - having a check being excessive paranoia.
 +
  
 
* Amina met Tanya at Stanford last Thursday.
 
* Amina met Tanya at Stanford last Thursday.
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*** But Midori doesn't want to be forced to drag and drop.
 
*** But Midori doesn't want to be forced to drag and drop.
 
** DBxref manager is working to add refs to multiple selected terms but this is very slow. Jen looking in to speeding this up.
 
** DBxref manager is working to add refs to multiple selected terms but this is very slow. Jen looking in to speeding this up.
 +
  
 
* Jen demo - merge GUI.  
 
* Jen demo - merge GUI.  
 
** Looks good, and although there are some confusing looking options, these seem to be explained well in the
 
** Looks good, and although there are some confusing looking options, these seem to be explained well in the
 
existing doc.
 
existing doc.
 +
  
 
* Amina - suggestion for future meetings.  Can others in the group contribute tips for a 'tip of the week' each meeting?
 
* Amina - suggestion for future meetings.  Can others in the group contribute tips for a 'tip of the week' each meeting?

Revision as of 10:03, 12 May 2009

OBO-Edit Working Group, Tuesday May 12th, 2009 9.30 a.m. PST

Conference call details:
US: 1-888-727-6732
Outside US: 1-719-867-3417
pin: 601425


Agenda/Chair: Midori
Minutes: Melissa
Attendees:

Action items carried over

  • UTF8 support
  • Ability to switch between incremental reasoning on/off states.
  • Image display improvements

Teaching Resources

  • Davids poster posted to the wiki:

http://wiki.geneontology.org/index.php/OBO-Edit:_References/Teaching_Resources#Posters

  • Link oboedit.org/SF download page from the main GO documentation
    • Midori - No fixed - points to oboedit.org download page so as to have less overhead to update GO documentation page every time a new release package is out.

Discussion items

  • Lost log files in latest version OE2
    • Midori and Harold can't see log files for new version OE2. David checked this - his not being updated either.
    • Jen, could this be connected with there being 2 different config folders?
      • But - other people don't have this issue, so probably not.
    • Amina will try to look into issue this week.



  • Feature request - Check/auto-update for when alt_id turns up in a consider or replaced_by tag.
    • Should we update automatically? Or perhaps have a verification check?
      • General agreement that it should be automatic - having a check being excessive paranoia.


  • Amina met Tanya at Stanford last Thursday.
    • Feature request arising from meeting with Tanya - set DBxref manager so can add DBxrefs to synonyms.
      • David: Would be v.useful to have this feature.
      • Jen and Harold: might make it easiest if we could do this all be dragging an dropping.
      • But Midori doesn't want to be forced to drag and drop.
    • DBxref manager is working to add refs to multiple selected terms but this is very slow. Jen looking in to speeding this up.


  • Jen demo - merge GUI.
    • Looks good, and although there are some confusing looking options, these seem to be explained well in the

existing doc.


  • Amina - suggestion for future meetings. Can others in the group contribute tips for a 'tip of the week' each meeting?

Demos/ Tips/ Ticks

Tip of the week

  • Adding multiple terms at one go and what to expect from this feature in the future! - Amina

Action Items

Links

Back to OEWG Meeting agenda and minutes List