OEWG 20110208: Difference between revisions
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===Fixed since last meeting:=== | ===Fixed since last meeting:=== | ||
* Users with older Macs that don't have Java 1.6 couldn't launch OE | * Users with older Macs that don't have Java 1.6 (such as Ramona) couldn't launch OE--see also [The JVM could not be started http://sourceforge.net/tracker/?func=detail&aid=3150956&group_id=36855&atid=418257] | ||
** Fixed--OE installer will now work even if you only have Java 1.5. | |||
** Pre-release available for those who need it--ask Nomi in email. | |||
<br /> | <br /> | ||
=== | ===Issues arried over from last meeting:=== | ||
* Chris fixed the bug where OE was failing to exclude disjoint relationships when checking is_a complete. | * Chris fixed the bug where OE was failing to exclude disjoint relationships when checking is_a complete. | ||
** Terry has question about is_a closure across different ontologies. He'll test beta8 and report any problems. | ** Terry has question about is_a closure across different ontologies. He'll test beta8 and report any problems. | ||
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** Discussed with Chris. Agreed on short-term fix: "if an aspect of a search cannot be performed without the reasoner, then it should be greyed out or otherwise indicated." | ** Discussed with Chris. Agreed on short-term fix: "if an aspect of a search cannot be performed without the reasoner, then it should be greyed out or otherwise indicated." | ||
*** Longer term possibilities--see discussion in [https://sourceforge.net/tracker/index.php?func=detail&aid=1899612&group_id=36855&atid=418257 Some filters give wrong answers unless reasoner turned on] | *** Longer term possibilities--see discussion in [https://sourceforge.net/tracker/index.php?func=detail&aid=1899612&group_id=36855&atid=418257 Some filters give wrong answers unless reasoner turned on] | ||
* [https://sourceforge.net/tracker/?func=detail&aid=2890891&group_id=36855&atid=418257 Obsolete terms appear in autocomplete dropdown lists]. | |||
** Current status: implemented removal of obsolete terms from autocomplete lists for searches of "Any text field" (will implement for other types of searches. | |||
*** This extra test slows down creation of autocomplete list. | |||
*** Accordingly, Becky suggested making this a user-configurable option (whether or not to exclude obsolete terms from autocomplete lists). Will add to Configuration Manager. | |||
* Terry wrote instructors for configuring a renderer to color terms by namespace (Thanks, Terry!). Nomi needs to add this to user guide. | |||
* Nomi will also add comments on reasoner + memory to user guide. | |||
===Next bugs to work on:=== | ===Next bugs to work on:=== | ||
* ID fixer: Chris thinks the ID fixer is buggy and that it needs to be fixed. However, I haven't seen any high-priority bugs posted about this (only a level-5 bug I posted myself several years ago). How important is this? | * ID fixer: Chris thinks the ID fixer is buggy and that it needs to be fixed. However, I haven't seen any high-priority bugs posted about this (only a level-5 bug I posted myself several years ago). How important is this? | ||
** Most wg members don't even know what it does! Nomi will bring it up with Chris. | ** Most wg members don't even know what it does! Nomi will bring it up with Chris. | ||
** Marcus often gets out-of-memory warning. Nomi (and GO editors) also sees it with GO and the reasoner. Not an easy fix. Work-around: edit with reasoner off, then SAVE, then reason. Nomi will add note to user guide. | ** Marcus often gets out-of-memory warning. Nomi (and GO editors) also sees it with GO and the reasoner. Not an easy fix. Work-around: edit with reasoner off, then SAVE, then reason. Nomi will add note to user guide. | ||
** Brainstorming possible ways to remind users that reasoner is on/to turn off reasoner when | ** Brainstorming possible ways to remind users that reasoner is on/to turn off reasoner when quitting/etc. | ||
* [https://sourceforge.net/tracker/?func=detail&aid=2309391&group_id=36855&atid=418257 Bad handling of unrecognized relation (text editor et al.)] | * [https://sourceforge.net/tracker/?func=detail&aid=2309391&group_id=36855&atid=418257 Bad handling of unrecognized relation (text editor et al.)] | ||
** I looked into this some--will not be simple to fix. Has to do with how dangling objects (e.g., unrecognized relations) are handled in different components. | ** I looked into this some--will not be simple to fix. Has to do with how dangling objects (e.g., unrecognized relations) are handled in different components. | ||
* Ramona has custom relations, and their icons have disappeared. She'll put in a bug report. | * Ramona has custom relations, and their icons have disappeared. She'll put in a bug report. | ||
* Becky put in bug report on autocomplete selection. Sounds familiar to several of us. Nomi will look at it. | * Becky put in bug report on autocomplete selection. Sounds familiar to several of us. Nomi will look at it. |
Revision as of 15:24, 7 February 2011
OBO-Edit Working Group Meeting: Tuesday, February 8th, 2011, 8:30am PST
Conference call details: New GOC conference call numbers
US: 1 866 953 9688
UK: 0808 238 6001
pin: 801561
Agenda/Chair: Nomi Harris
Minutes:
Attendees:
Action items carried over
Bug and Feature Tracker Updates
Discussion items
Fixed since last meeting:
- Users with older Macs that don't have Java 1.6 (such as Ramona) couldn't launch OE--see also [The JVM could not be started http://sourceforge.net/tracker/?func=detail&aid=3150956&group_id=36855&atid=418257]
- Fixed--OE installer will now work even if you only have Java 1.5.
- Pre-release available for those who need it--ask Nomi in email.
Issues arried over from last meeting:
- Chris fixed the bug where OE was failing to exclude disjoint relationships when checking is_a complete.
- Terry has question about is_a closure across different ontologies. He'll test beta8 and report any problems.
Currently working on
Some filters give wrong answers unless reasoner turned on
- Discussed with Chris. Agreed on short-term fix: "if an aspect of a search cannot be performed without the reasoner, then it should be greyed out or otherwise indicated."
- Longer term possibilities--see discussion in Some filters give wrong answers unless reasoner turned on
- Discussed with Chris. Agreed on short-term fix: "if an aspect of a search cannot be performed without the reasoner, then it should be greyed out or otherwise indicated."
- Obsolete terms appear in autocomplete dropdown lists.
- Current status: implemented removal of obsolete terms from autocomplete lists for searches of "Any text field" (will implement for other types of searches.
- This extra test slows down creation of autocomplete list.
- Accordingly, Becky suggested making this a user-configurable option (whether or not to exclude obsolete terms from autocomplete lists). Will add to Configuration Manager.
- Current status: implemented removal of obsolete terms from autocomplete lists for searches of "Any text field" (will implement for other types of searches.
- Terry wrote instructors for configuring a renderer to color terms by namespace (Thanks, Terry!). Nomi needs to add this to user guide.
- Nomi will also add comments on reasoner + memory to user guide.
Next bugs to work on:
- ID fixer: Chris thinks the ID fixer is buggy and that it needs to be fixed. However, I haven't seen any high-priority bugs posted about this (only a level-5 bug I posted myself several years ago). How important is this?
- Most wg members don't even know what it does! Nomi will bring it up with Chris.
- Marcus often gets out-of-memory warning. Nomi (and GO editors) also sees it with GO and the reasoner. Not an easy fix. Work-around: edit with reasoner off, then SAVE, then reason. Nomi will add note to user guide.
- Brainstorming possible ways to remind users that reasoner is on/to turn off reasoner when quitting/etc.
- Bad handling of unrecognized relation (text editor et al.)
- I looked into this some--will not be simple to fix. Has to do with how dangling objects (e.g., unrecognized relations) are handled in different components.
- Ramona has custom relations, and their icons have disappeared. She'll put in a bug report.
- Becky put in bug report on autocomplete selection. Sounds familiar to several of us. Nomi will look at it.
Demo
none
Action Items
- Nomi will email wg mailing list to remind members how to unsubscribe if they want.
- Terry will write instructions on how to use renderers to color terms by namespaces. Nomi will add to the user guide.
- Ramona will submit bug report on disappearing relation icons.
- Nomi will add note about reasoner & memory to user guide.
- Nomi will look at autocomplete selection bug again.