October2010 Annotation Advocacy Report: Difference between revisions

Latest revision as of 09:16, 15 April 2019

Making Progress with updating Documentation

Continuing to work on Col. 16 cell type documentation. A first draft should be available early November.

Hard QC checks

Two more hard QC checks were sent around the GO mailing list for approval.

1) Correct format of references should be e.g.SGD_REF:S000047763|PMID:2676709

2) The ND evidence code should be used for annotations to the root nodes only and should be accompanied with the reference GO_REF:0000015 or an internal MOD reference that is listed as an external accession in the documentation

Details of these QC checks are on the wiki

Soft QC checks

Started a wiki page for Soft QC checks (it is at the bottom of the Annotation Quality Control checks page- http://gocwiki.geneontology.org/index.php/Annotation_Quality_Control_Checks)

Signaling overhaul

A call focusing on the signaling overhaul happened on 18th October. The minutes are here

Annotation Jamboree

The annotation jamboree will be in November. Curators will annotate two papers on yeast transcription and send their annotations to Rama by 5th November. Rama will collate the annotations and a call-based discussion will happen on 8th November 4pm to talk about issues encountered during annotation. The details of the jamboree are here

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+[[Category:Reports - Annotation group]]
 ==Making Progress with updating Documentation==
+Continuing to work on Col. 16 cell type documentation. A first draft should be available early November.
+==Hard QC checks==
+Two more hard QC checks were sent around the GO mailing list for approval.
+) Correct format of references should be e.g.SGD_REF:S000047763|PMID:2676709
+) The ND evidence code should be used for annotations to the root nodes only and should be accompanied with the reference GO_REF:0000015 or an internal MOD reference that is listed as an external accession in the [http://www.geneontology.org/cgi-bin/references.cgi#GO_REF:0000015 documentation]
-==Hard QC checks==
+Details of these QC checks are on the [http://gocwiki.geneontology.org/index.php/Annotation_Quality_Control_Checks#5._Proposed_Hard_QC_checks_for_ND_and_reference_format wiki]
+==Soft QC checks==
+Started a wiki page for Soft QC checks (it is at the bottom of the Annotation Quality Control checks page- http://gocwiki.geneontology.org/index.php/Annotation_Quality_Control_Checks)
 ==Signaling overhaul==
-A call focusing on the transcription overhaul happened on 18th October
+A call focusing on the signaling overhaul happened on 18th October. The minutes are [http://gocwiki.geneontology.org/index.php/October_18th_2010 here]
 ==Annotation Jamboree==
-The plan is to have an annotation jamboree in November that is based on curators annotating a couple of chosen papers. A call-based discussion will happen when the annotation is complete to talk about issues encountered during annotation.
+The annotation jamboree will be in November. Curators will annotate two papers on yeast transcription and send their annotations to Rama by 5th November. Rama will collate the annotations and a call-based discussion will happen on 8th November 4pm to talk about issues encountered during annotation. The details of the jamboree are [http://gocwiki.geneontology.org/index.php/Agenda_for_November_8th here]