Latest revision as of 21:46, 19 April 2024

Group's focus

This group's purpose is to ensure that the Gene Ontology represents biology in a way that is useful for gene product annotation of reference genomes and other MODs using the GO for annotation. The group serves as the link between biological knowledge that is gained from wet-bench scientists and the representation of that knowledge in the GO. Members of the group are responsible for reporting areas of the GO that need development and for suggesting changes and additions to the GO as needs arise. Members of the group serve as biological experts in domains that are covered by their organism. They are responsible for reviewing changes to be sure that they accurately reflect our current understanding of biology. With the help of the software team the group create rules to ensure the ontology's integrity.

Group Leader

Pascale Gaudet (GO Central); GitHub: @pgaudet

Ontology editors

Pascale Gaudet, Raymond Lee, Val Wood

Software support

Jim Balhoff

Other group members

Tanya Berardini, Peter D'Eustachio, Steven Marygold, Li Ni, Kimberly VanAuken

PIs

Chris Mungall, Paul Thomas

Communication

Editor's Conference calls

When

Calls are held weekly on Mondays, 12:00PM-1:00PM EST
Calls are scheduled on the GO's Google calendar. Please request access to the calendar if you don't have it.
Reminder emails are sent out to the go-ontology mailing list (see Internal_email_lists to register).

Agenda and Minutes

2024
Past Ontology Editors' Calls: 2005-2010 | 2011 | 2012 | 2013 | 2014 | 2015 | 2016 | 2017 | 2018 | 2019 | 2020 | 2021 | 2022 | 2023

GO ontology in GitHub

The Gene Ontology uses an issue tracker hosted on GitHub to record and track ontology issues.
The go-annotation repo on GitHub may be accessed here.
Contact information for each group that contributes to the consortium is available here

GO ontology on slack

The GO consortium uses GO Slack as an informal chat service: go-ontology slack channel.

Ontology release pipeline

Release Pipeline

@@ Line 1: / Line 1: @@
-This group's purpose is to ensure that the Gene Ontology represents biology in a way that is useful for gene product annotation of reference genomes and other MODs using the GO for annotation. The group serves as the link between biological knowledge that is gained from wet-bench scientists and the representation of that knowledge in the GO. Members of the group are responsible for reporting areas of the GO that need development and for suggesting changes and additions to the GO as needs arise. Members of the group serve as biological experts in domains that are covered by their organism. They are responsible for reviewing changes to be sure that they accurately reflect our current understanding of biology.
+= Group's focus =
+This group's purpose is to ensure that the Gene Ontology represents biology in a way that is useful for gene product annotation of reference genomes  and other MODs using the GO for annotation. The group serves as the link between biological knowledge that is gained from wet-bench scientists and the representation of that knowledge in the GO. Members of the group are responsible for reporting areas of the GO that need development and for suggesting changes and additions  to the GO as needs arise. Members of the group serve as biological experts in domains that are covered by their organism. They are responsible for reviewing changes to be sure that they accurately reflect our current understanding of biology.
+With the help of the software team the group create rules to ensure the ontology's integrity.
-==Administrative==
+= Group Leader =
-*[[Ontology Development group summary]]
+Pascale Gaudet (GO Central); GitHub: @pgaudet
-*[[Ontology Development task list|Task list]]
-==Content Development ==
+== Ontology editors==
-===Current content work===
+Pascale Gaudet, Raymond Lee, Val Wood
-*[[Isa-complete_BP|is_a complete biological process]]
-*[[:Category:Content PAMGO|PAMGO collaboration]]
-*[[Regulation cross-products]]
-*[[Cell cross-products]]
-===Future content work===
+==Software support==
-*[[Sensu Plans]]
+Jim Balhoff
-*[[Response to drug]]
-*Cardiovascular physiology/development
-*Peripheral nervous system development
-===Completed content work===
+== Other group members==
-(this will have links to summaries, which can in turn link to anything relevant in wiki, and maybe to SF items)
+Tanya Berardini, Peter D'Eustachio, Steven Marygold, Li Ni, Kimberly VanAuken
-==Other Ontology Development Group Activities==
+==PIs==
-*[[Tracker wishlist]]
+Chris Mungall, Paul Thomas
-*[[Webinar Software Investigation]]
-*[[Content Meeting Documentation]]
+=Communication=
+==Editor's Conference calls==
+=== When ===
+* Calls are held weekly on Mondays, 12:00PM-1:00PM EST
+* Calls are scheduled on the GO's Google calendar.  Please request access to the calendar if you don't have it.
+* Reminder emails are sent out to the go-ontology mailing list (see [[Internal_email_lists]] to register).
+=== Agenda and Minutes ===
+* [[Ontology editors' conference call minutes 2024|2024]]
+* Past Ontology Editors' Calls: [[Ontology Development reports 2005-2010|2005-2010]] |  [[Ontology editor's conference call minutes 2011|2011]] | [[Ontology editor's conference call minutes 2012|2012]] | [[Ontology editor's conference call minutes 2013|2013]] | [[Ontology editor's conference call minutes 2014|2014]] |  [[Ontology editor's conference call minutes 2015|2015]] | [[Ontology editor's conference call minutes 2016|2016]] | [[Ontology editor's conference call minutes 2017|2017]] | [[Ontology editor's conference call minutes 2018|2018]] | [[Ontology editors' conference call minutes 2019|2019]] | [[Ontology editors' conference call minutes 2020|2020]] | [[Ontology editors' conference call minutes 2021|2021]] | [[Ontology editors' conference call minutes 2022|2022]] | [[Ontology editors' conference call minutes 2023|2023]]
+===GO ontology in GitHub===
+* The Gene Ontology uses an issue tracker hosted on [https://github.com/geneontology GitHub] to record and track ontology issues.
+* The go-annotation repo on GitHub may be accessed [https://github.com/geneontology/go-ontology here].
+* Contact information for each group that contributes to the consortium is available [https://github.com/geneontology/go-site/blob/master/metadata/group-contacts.csv here]
+===GO ontology on slack===
+*The GO consortium uses [https://geneontologyworkspace.slack.com/home GO Slack] as an informal chat service: [https://app.slack.com/client/T01NYRYPN6T/C01PAGWQM7X go-ontology slack channel].
+==Ontology release pipeline==
+* [[Release Pipeline]]
+[[Category:Ontology]][[Category:GO Editors]]

Ontology Development: Difference between revisions