Ontology editor plugins: Difference between revisions
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== Plugins that emulate OBO-Edit == | == Plugins that emulate OBO-Edit == | ||
* Jim Balhoff's obsoletion-util p4 plugin https://github.com/balhoff/obo-actions/downloads | * Jim Balhoff's obsoletion-util p4 plugin https://github.com/balhoff/obo-actions/downloads | ||
** Once installed, you should see an "obsolete" option in your Edit menu | |||
* OBO style graph view for Protege http://code.google.com/p/obographview/ | * OBO style graph view for Protege http://code.google.com/p/obographview/ | ||
** See Views/Ontology views | |||
* Term Metadata editor plugin (Alpha) https://github.com/hdietze/protege-obo-plugins/raw/master/org.protege.oboeditor.jar | * Term Metadata editor plugin (Alpha) https://github.com/hdietze/protege-obo-plugins/raw/master/org.protege.oboeditor.jar | ||
** Expect more releases soon | |||
* Spell checker plugin (planned) | * Spell checker plugin (planned) | ||
Revision as of 18:53, 21 April 2014
Protege Plug-Ins
Plugins that emulate OBO-Edit
- Jim Balhoff's obsoletion-util p4 plugin https://github.com/balhoff/obo-actions/downloads
- Once installed, you should see an "obsolete" option in your Edit menu
- OBO style graph view for Protege http://code.google.com/p/obographview/
- See Views/Ontology views
- Term Metadata editor plugin (Alpha) https://github.com/hdietze/protege-obo-plugins/raw/master/org.protege.oboeditor.jar
- Expect more releases soon
- Spell checker plugin (planned)
Other useful plugins
- Jim Balhoff's depictions plugin https://github.com/balhoff/image-depictions-view/downloads
- Jim Balhoff's obo-lint P4 plugin https://github.com/balhoff/obo-lint/downloads
Next Generation GeneOntology Annotation Model (a.k.a. LEGO)
- LEGO annotation view Protege plug-in http://code.google.com/p/owltools/downloads/list?q=lego
- Documentation: http://geneontology.org//experimental/lego/docs/Lego-plugin.docx
- Beta version (including minimal model generation): http://geneontology.org//experimental/lego/tmp
Note: this has now be succeeded by Orion, the web based version