Ontology editor plugins: Difference between revisions

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(Created page with "=Protege Plug-Ins= == Productivity and OBO-related == * Jim Balhoff's obo-lint P4 plugin https://github.com/balhoff/obo-lint * Jim Balhoff's obsoletion-util p4 plugin * Jim Balho...")
 
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#REDIRECT [[Protege_setup_for_GO_Eds]]
=Protege Plug-Ins=
=Protege Plug-Ins=
== Productivity and OBO-related ==
== Plugins that emulate OBO-Edit ==
* Jim Balhoff's obo-lint P4 plugin https://github.com/balhoff/obo-lint
* Jim Balhoff's obsoletion-util p4 plugin https://github.com/balhoff/obo-actions/downloads
* Jim Balhoff's obsoletion-util p4 plugin
** Once installed, you should see an "obsolete" option in your Edit menu
* Jim Balhoff's depictions plugin https://github.com/balhoff/image-depictions-view
* OBO style graph view for Protege https://github.com/owlcollab/obographview
* OBO style graph view for Protege http://code.google.com/p/obographview/
** See Views/Ontology views
* Term Metadata editor plugin (Alpha) https://github.com/hdietze/protege-obo-plugins/raw/master/org.protege.oboeditor.jar
** Expect more releases soon
* Spell checker plugin (planned)
 
== Other useful plugins ==
* Jim Balhoff's depictions plugin https://github.com/balhoff/image-depictions-view/downloads
* Jim Balhoff's obo-lint P4 plugin https://github.com/balhoff/obo-lint/downloads


== Next Generation GeneOntology Annotation Model (a.k.a LEGO) ==
== Next Generation GeneOntology Annotation Model (a.k.a. LEGO) ==
* LEGO annotation view Protege plug-in http://code.google.com/p/owltools/downloads/list?q=lego
* LEGO annotation view Protege plug-in http://code.google.com/p/owltools/downloads/list?q=lego
** Documentation: http://geneontology.org//experimental/lego/docs/Lego-plugin.docx
** Beta version (including minimal model generation): http://geneontology.org//experimental/lego/tmp
Note: this has now be succeeded by Orion, the web based version
[[Category:Protege]]

Latest revision as of 11:19, 8 July 2019

Protege Plug-Ins

Plugins that emulate OBO-Edit

Other useful plugins

Next Generation GeneOntology Annotation Model (a.k.a. LEGO)

Note: this has now be succeeded by Orion, the web based version