Ontology meeting 2012-01-11: Difference between revisions
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==Discussion notes I: Additional Relationships in Cellular Component== | ==Discussion notes I: Additional Relationships in Cellular Component== | ||
* Can we add new relationships to GO cellular component? including: | * Can we add new relationships from the Relation ontology to GO cellular component? including: | ||
===derives_from=== | ===derives_from=== | ||
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*E.g. late endosome ; GO:0005770 ''derives_from'' early endosome ; GO:0005769 | *E.g. late endosome ; GO:0005770 ''derives_from'' early endosome ; GO:0005769 | ||
The current is_a relationships don't show this as well as we'd like | The current ''is_a'' relationships don't show this as well as we'd like | ||
Revision as of 12:09, 14 December 2011
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Discussion notes
Discussion notes I: Additional Relationships in Cellular Component
- Can we add new relationships from the Relation ontology to GO cellular component? including:
derives_from
- E.g. acroblast derives_from Golgi apparatus ; GO:0005794 (may be able to be more specific)
- E.g. mitochondrial derivative ; GO:0016007 derives_from mitochondrion ; GO:0005739
- E.g. late endosome ; GO:0005770 derives_from early endosome ; GO:0005769
The current is_a relationships don't show this as well as we'd like
adjacent_to
- E.g. nuclear membrane ; GO:0031965 adjacent_to cytoplasm ; GO:0005737
See [1]
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