Ontology meeting 2013-05-02: Difference between revisions

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Stems from [https://sourceforge.net/tracker/?func=detail&aid=3612043&group_id=36855&atid=440764 SF on sperm motility]
Stems from [https://sourceforge.net/tracker/?func=detail&aid=3612043&group_id=36855&atid=440764 SF on sperm motility]


* http://purl.obolibrary.org/obo/go/extensions/x-quality.obo
* http://purl.obolibrary.org/obo/go/extensions/bbq.obo


===Template for receptor activities===
===Template for receptor activities===


Seems we missed these with the chemical xps. They're complicated because mechanism and substrate are often combined, but we should be easily able to make templates for some. The pattern should be the same as binding. Has there been an obol pass on these?
Seems we missed these with the chemical xps. They're complicated because mechanism and substrate are often combined, but we should be easily able to make templates for some. The pattern should be the same as binding. Has there been an obol pass on these?

Revision as of 19:06, 1 May 2013

Minutes: Paola

Attendees:


Links report including cell types

See report at http://build.berkeleybop.org/job/build-go-assert-inferences/22/artifact/assert-report.txt

Was there any discussion on this at the latest CL call? Did Alex provide any feedback outside the call? In general, are there areas of the CL that we should be more 'wary' of?


(Feasibility and strategy for) providing hard links from apoptosis terms to the apoptosis curation manual on the wiki

In particular, linking to annotation examples in the apoptosis curation manual. Stemming from apoptosis project & discussion - Pascale suggested this at the GOC meeting, other curators also asked.


Templates for regulation of biological qualities

For creating 'regulation of biological trait/quality' terms in TermGenie, do we need to come up with our own mini-ontology of traits?

Stems from SF on sperm motility

Template for receptor activities

Seems we missed these with the chemical xps. They're complicated because mechanism and substrate are often combined, but we should be easily able to make templates for some. The pattern should be the same as binding. Has there been an obol pass on these?