Ontology meeting 2016-12-01: Difference between revisions

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==Tickets for discussion at this meeting:==
==Tickets for discussion at this meeting:==
See https://github.com/geneontology/go-ontology/projects/1, column labeled "Ontology Call December 1, 2016" on the right


#[https://github.com/geneontology/go-ontology/issues/12815 Add check for identical definitions in ontology file?]
#[https://github.com/geneontology/go-ontology/issues/12815 Add check for identical definitions in ontology file?]

Revision as of 05:55, 30 November 2016

Attendees:

Regrets:


GoToMeeting invite: https://global.gotomeeting.com/join/859015101

End of EBI subcontract - plans to wrap up

End of subcontract end of February 2017. EBI GO editors (DOS, Paola, Melanie) will step off the GO rotas (GH, TG, Helpdesk) starting December 12th to allow wrap-up of existing tickets concomitantly with other tasks.

Tickets for discussion at this meeting:

See https://github.com/geneontology/go-ontology/projects/1, column labeled "Ontology Call December 1, 2016" on the right

  1. Add check for identical definitions in ontology file?
  2. Review MF term GO:0050827 'toxin receptor binding'
  3. Ghost relations in the obo-file
  4. Discussion of 'positive regulation' and 'maintenance'
  5. MP: (recently removed ) parentage in amino acid metabolism
  6. Merge directly_activates/inhibits relations into directly_positively/negatively_regulates.