Ontology meeting 2016-12-01

From GO Wiki
Revision as of 10:20, 30 November 2016 by Judy (talk | contribs) (End of EBI subcontract - plans to wrap up)

Jump to: navigation, search

Attendees:

Regrets:


GoToMeeting invite: https://global.gotomeeting.com/join/859015101

PI discussion of next months' EBI-GO work plan

End of subcontract with EBI of February 2017. EBI-GO (DOS, Paola, Melanie). Helen has proposed that EBI-GO will step off the GO rotas (GH, TG, Helpdesk) starting December 12th to allow wrap-up of existing tickets concomitantly with other tasks. David Hill (as Ontology Lead ) as GO PIs will discuss further with Helen.

Note that TAIR's subcontract also ends at the end of Feb. 2017.

Tickets for discussion at this meeting:

See https://github.com/geneontology/go-ontology/projects/1, column labeled "Ontology Call December 1, 2016" on the right

  1. Add check for identical definitions in ontology file?
  2. Review MF term GO:0050827 'toxin receptor binding'
  3. Ghost relations in the obo-file
  4. Discussion of 'positive regulation' and 'maintenance'
  5. MP: (recently removed ) parentage in amino acid metabolism
  6. Merge directly_activates/inhibits relations into directly_positively/negatively_regulates.