Ontology meeting 2018-06-11: Difference between revisions

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(Created page with "= Conference Line = *Zoom: https://stanford.zoom.us/j/828418143 = Agenda = == Editors Discussion == ===Ontology Developers' workshop possibility- Geneva in September?=== *...")
 
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=== Obsoletion plugin for Protege ===
=== Obsoletion plugin for Protege ===
Does everyone have Jim's plugin? If not we should all install it and I will update the documentation.
Does everyone have Jim's plugin? If not we should all install it and I will update the documentation.
What is the status of the merge plugin?
What is the status of the merge plugin?
What is the best way to determine if a term is used in another ontology?


Is it okay to resurrect obsoleted terms?
Is it okay to resurrect obsoleted terms?

Revision as of 01:47, 11 June 2018

Conference Line

Agenda

Editors Discussion

Ontology Developers' workshop possibility- Geneva in September?

  • David, Pascale and Kimberly will discuss possible dates and make a doodle poll.

Issue with SVN release

The SVN Release is failing, but in the live editors file, but the error that is being reported doesn't appear in the editors' version of the ontology.

Regenerate Imports File

We continue to have issues with imported files. Although we can modify the import files, this isn't really a solution.

Obsoletion plugin for Protege

Does everyone have Jim's plugin? If not we should all install it and I will update the documentation.

What is the status of the merge plugin?

What is the best way to determine if a term is used in another ontology?

Is it okay to resurrect obsoleted terms?

Ontology Documentation

Pascale, David and Kimberly have been working on standardizing the ontology documentation to make it align with the documentation work that Kimberly and Pascal have been doing for other areas of GO. Specifically, we have moved the official documentation to the wiki and have arranged the wiki in a way that is similar to the annotation section. We are now going through the documentation to check it for accuracy and to be sure it is up to date.


GH project link

https://github.com/geneontology/go-ontology/projects/1

Minutes

  • On call: