Ontology meeting 2019-01-07: Difference between revisions

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= Conference Line =
= Conference Line =
*Zoom: https://stanford.zoom.us/j/828418143


= Agenda =
= Agenda =
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===GOC Hackathon===
===GOC Hackathon===
===GOC Meeting Cambridge===
*GOC meeting - Cambridge, UK April 11th - 13th (right after ISB meeting)


==Discussion topics==
==Discussion topics==
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* At the Geneva meeting we noticed that the definitions of the MF terms that Harold added recently did not match either the EC xref or the MetaCyc xref.
* At the Geneva meeting we noticed that the definitions of the MF terms that Harold added recently did not match either the EC xref or the MetaCyc xref.
** Harold will report on the extent of the problem.
** Harold will report on the extent of the problem.
** To handle this, should we keep the MFs as originally defined and add parent terms that correspond to the correct EC's if they don't exist? This would allow us to classify these with respect to Rhea as well.
** Harold will add Rhea xrefs to terms where the xref is valid. Harold will work with Tanya to make sure that whatever we do will still be ok with the plant community.


===Addition of new has_input subclasses===
===Addition of new has_input subclasses===

Latest revision as of 08:16, 23 January 2019

Conference Line

Agenda

Meetings

GOC Hackathon

GOC Meeting Cambridge

  • GOC meeting - Cambridge, UK April 11th - 13th (right after ISB meeting)

Discussion topics

Analysis of plant enzymes

  • At the Geneva meeting we noticed that the definitions of the MF terms that Harold added recently did not match either the EC xref or the MetaCyc xref.
    • Harold will report on the extent of the problem.
    • Harold will add Rhea xrefs to terms where the xref is valid. Harold will work with Tanya to make sure that whatever we do will still be ok with the plant community.

Addition of new has_input subclasses

Other business

Minutes

  • On call: