Difference between revisions of "Ontology meeting 2019-09-16"

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(Created page with " ==CC relations: overlaps/adjacent_to== * Draft documentation: https://docs.google.com/document/d/1OsE19zh8KE_2wT3-8oJysqEGqy-fahnhcjthO34IWP4/edit# * Annotations to 'adja...")
 
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= Conference Line =
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See calendar for details
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= Agenda =
  
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==Discussion topics==
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===GOC Meeting===
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* 2019 Oct GOC meeting - Berkeley, CA: October 7-10, 2019 (User Meeting Oct 7, GOC meeting Oct 8-10, SAB meeting Oct 11)
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** [[2019 Berkeley GOC User Meeting Logistics]]
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** [[2019 Berkeley GOC User Meeting Agenda]]
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** [[2019 Berkeley GOC Meeting Logistics]]
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** [[2019 Berkeley GOC Meeting Agenda]]
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** [[2019 Berkeley SAB Meeting Logistics]]
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** [[2019 Berkeley SAB Meeting Agenda]]
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* We need to decide who is presenting what at each of these meetings.
  
 
==CC relations:  overlaps/adjacent_to==
 
==CC relations:  overlaps/adjacent_to==
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*'olfactory tract linking bulb to ipsilateral ventral telencephalon' <http://purl.obolibrary.org/obo/UBERON_2000238>
 
*'olfactory tract linking bulb to ipsilateral ventral telencephalon' <http://purl.obolibrary.org/obo/UBERON_2000238>
  
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===Other Business===
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https://github.com/geneontology/go-ontology/projects/1
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====Minutes should be recorded on individual tickets and in individual projects====
  
  
 
[[Category:Meetings]]
 
[[Category:Meetings]]
 
[[Category:Ontology]]
 
[[Category:Ontology]]

Latest revision as of 03:05, 13 September 2019

Conference Line

See calendar for details

Agenda

Discussion topics

GOC Meeting

  • We need to decide who is presenting what at each of these meetings.

CC relations: overlaps/adjacent_to

  • Draft documentation:

https://docs.google.com/document/d/1OsE19zh8KE_2wT3-8oJysqEGqy-fahnhcjthO34IWP4/edit#

  • No annotations to 'overlaps' in the download from June 2019
  • How can we make rules for these two relations?
    • Do we need to define in the ontology, components that are adjacent to cells, and components that overlap?
    • Should we make a distinction (ie use a different relation) for intracellular adjacency vs. extracellular ?
    • 'Overlaps': Current usage in the ontology:

In LD:

In Subclasses:


Other Business

https://github.com/geneontology/go-ontology/projects/1

Minutes should be recorded on individual tickets and in individual projects