Ontology meeting 2019-12-16

Conference Line

See calendar for details

On call:

Agenda

Project Reports

Active Projects

• Rhea alignment project (Harold)
  • https://github.com/geneontology/go-ontology/projects/10
  • Personnel: Harold, Peter, Ben, David

• ChEBI Roles (Karen)
  • https://github.com/geneontology/go-ontology/projects/21
  • Personnel: Karen, Chris

• Regulates_o_part_of (Jim)
  • https://github.com/geneontology/go-ontology/issues/13926
  • Personnel: Jim, David, Tanya, Val, Barbara

Other(Future)Projects

• Protein complexes
  • https://github.com/geneontology/go-ontology/projects/8
  • https://github.com/orgs/geneontology/projects/24
  • Personnel: Ben, David, Peter, Kimberly, Huaiyu, Jim, Chris, PaulT + others?

• Spatial relations in GO
  • https://github.com/geneontology/go-ontology/projects/18
  • Personnel: Kimberly, David, Peter, Jim

• Disjoint Classes
  • https://github.com/geneontology/go-ontology/projects/23
  • Personnel: Chris, David, subdomain experts

Proposed (but not ready) Projects

• GO-CAM templates and design patterns
  • https://github.com/geneontology/go-ontology/projects/16
  • Dependent on Noctua and GO-CAM specifications

• BP refactoring
  • https://github.com/geneontology/go-ontology/projects/15
  • Scope and objectives are not well-defined.
    • What are the current problems?

• Refactor Growth branch of the ontology
  • https://github.com/geneontology/go-ontology/projects/13
  • Scope and objectives are not well-defined.

• Refactor DNA repair
  • https://github.com/geneontology/go-ontology/projects/12
  • Scope and objectives are not well-defined.

Other Business

• Anything to report on from the alliance meeting or should we wait until Kimberly returns?