Ontology meeting 2020-01-27: Difference between revisions
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**'results in division of' (GOREL:0001019) | **'results in division of' (GOREL:0001019) | ||
*GO | |||
[Typedef] | [Typedef] | ||
id: results_in_division_of | id: results_in_division_of | ||
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is_a: has_participant ! has participant | is_a: has_participant ! has participant | ||
*GOREL | |||
[Typedef] | [Typedef] | ||
id: results_in_division_of | id: results_in_division_of |
Revision as of 11:51, 23 January 2020
Conference Line
See calendar for details
On call:
Agenda
Discussion topics
Aligning Ontology, Annotation, ShEx
- We are creating ontology term-specific shapes in the ShEx schema for what is allowed for annotation (both standard and GO-CAM)
- We are also moving towards only using RO relations in GO, i.e. retiring, or incorporating into RO, GOREL relations or RO-pending relations
- GOREL relations proposed to RO:
- GOREL relations that could be retired and replaced with an existing RO relation:
- 'results in division of' (GOREL:0001019)
- GO
[Typedef] id: results_in_division_of name: results_in_division_of namespace: external comment: use occurs_in xref: GOREL:0001019 is_a: has_participant ! has participant
- GOREL
[Typedef] id: results_in_division_of name: results_in_division_of namespace: go/extensions/gorel def: "The relationship linking a entity and its participation in a process that results in the division of the entity into two entities of the same type." [GOC:mtg_berkeley_2013] comment: Example of use: an annotation of gene X to cell division with results_in_division_of CL:0000057 (fibroblast) means that at the end of the process a single fibroblast has divided into two fibroblasts. subset: AE_cell_or_anatomical subset: display_for_curators subset: valid_for_annotation_extension xref: GOREL:0001019 property_value: local_domain BFO:0000015 xsd:string property_value: local_range "CL:0000000 WBbt:0004017" xsd:string property_value: usage "The relationship linking a entity and its participation in a process that results in the division of the entity into two entities of the same type." xsd:string domain: BFO:0000015 range: CL:0000000 is_a: go_annotation_extension_relation ! go annotation extension relation is_a: has_participant ! has participant
Other Business
https://github.com/geneontology/go-ontology/projects/1