Ontology meeting 2020-06-29: Difference between revisions
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==Retiring gorel relations== | ==Retiring gorel relations== | ||
*acts on population of -> added to RO; need to update logical definitions that use this relation (cell population proliferation children and some homeostasis terms) | *'acts on population of' -> added to RO; need to update logical definitions that use this relation (cell population proliferation children and some homeostasis terms) | ||
*exists during -> replace with [https://www.ebi.ac.uk/ols/ontologies/ro/properties?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FRO_0002490 existence overlaps] but with a modified | *'exists during' -> replace with [https://www.ebi.ac.uk/ols/ontologies/ro/properties?iri=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FRO_0002490 'existence overlaps'] but with a modified definition? | ||
** | **X existence overlaps y iff the connected temporal region T1 in which the continuant X exists overlaps the connected temporal region during which y occurs | ||
**'exists during' is currently only used in annotation extensions, but 'existence overlaps' could perhaps be used in logical definitions of some CC terms, e.g. mitotic spindle? | |||
==Other Business== | ==Other Business== |
Latest revision as of 10:17, 23 June 2020
Conference Line
See calendar for details
Agenda
Retiring gorel relations
- 'acts on population of' -> added to RO; need to update logical definitions that use this relation (cell population proliferation children and some homeostasis terms)
- 'exists during' -> replace with 'existence overlaps' but with a modified definition?
- X existence overlaps y iff the connected temporal region T1 in which the continuant X exists overlaps the connected temporal region during which y occurs
- 'exists during' is currently only used in annotation extensions, but 'existence overlaps' could perhaps be used in logical definitions of some CC terms, e.g. mitotic spindle?
Other Business
https://github.com/geneontology/go-ontology/projects/1